Marinagarivorans cellulosilyticus: MARGE09_P1873
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Entry
MARGE09_P1873 CDS
T07868
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
marq
Marinagarivorans cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marq03032
]
MARGE09_P1873
03400 DNA repair and recombination proteins [BR:
marq03400
]
MARGE09_P1873
Enzymes [BR:
marq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MARGE09_P1873
DNA replication proteins [BR:
marq03032
]
Prokaryotic type
DNA Topoisomerases
MARGE09_P1873
DNA repair and recombination proteins [BR:
marq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MARGE09_P1873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_2
Toprim_4
Zn_ribbon_GRF
Motif
Other DBs
NCBI-ProteinID:
BCD97672
UniProt:
A0AAN1WHG5
LinkDB
All DBs
Position
2454351..2456375
Genome browser
AA seq
674 aa
AA seq
DB search
MSILFVVESPNKAKSIRNYFPDFKVVATVGHFRDLPVDRIGAEPPKHEPEYVTMEGKADV
EKNLRAAANKASVIYLATDPDREGEAIAAHVANLLGQKHKAKIHRVTYVEVNKKSIEHAI
KQKRQIDWALVRAQEARRVIDRYVGYIVSPVLTNKFKEHVSAIHFLSAGRVQTIALKLIV
ERQRTIKNFKPVEHYGVTAHCLKDGVDYKAQWAATGINDDGCASTEDGEKKQGSGLVTDR
ALAEAVNARTDTLTVFQVQKKAVAIAPPKPLTTSSFVRLMSGKLRLTTKASMDAAQKLFE
QGLITYHRTDSPVMSKDAQEAVRAFARQQGLPVPEAARTVKAKQGSQEGHECLRVTDIAN
TRPELVDQSLMKVYQLVWLTTLQSQLANAIDDRTTVILKNGTEDVFIAKGSVQKELGWRA
SLKLSKDDSIESEKIRGGEEKIAKLPMLAEGEAAIVESTTLEIKHTKPPSVFSEKTLVEK
LDKLNIGRPATYAQIIERINEQGYIERDTKLNLTSTALGECVIDVLDGQYSFLNYEYTAE
LESLFDQIADRKHEMSYLPVVDAVYSSLEFDSSTLEALALPTVICEKMRQVKPKAKPKSK
SKKSGAKKMGTVVAFSSAKKNSGMDKSSFVAGTQCTTCRSGTLSIKALKGGDIIGKEFVG
CSAFPTCKHFQWVN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtccattttatttgttgtcgaatcaccgaataaagctaagagcattcgtaactatttc
cctgattttaaagtcgtcgcaacggtgggtcactttcgtgatctgcctgttgatcgaatt
ggcgctgagccgccaaagcatgagccagagtatgtaacgatggagggcaaagcggatgtt
gagaaaaatctccgtgctgccgcgaataaagcttcagtgatttatctggcgaccgatccc
gaccgtgagggcgaagcgatcgcagcacatgttgcgaatttgctcgggcaaaaacacaag
gcaaagattcatcgcgtgacctatgtcgaagtcaataaaaaatcgattgagcatgcaata
aaacaaaaaagacaaattgattgggcgctggttcgcgcgcaagaagctcgacgggttatt
gaccgttatgtcggttacatcgtgtctcctgtgctgacaaacaaatttaaagagcatgtc
agtgcaattcactttttgagcgcgggtcgcgttcaaacgattgcgttaaagctcattgtt
gagcgtcagcgaacgatcaaaaattttaagcctgtcgagcactacggtgtgacggcgcat
tgcttgaaagacggggtcgattataaagcgcagtgggctgcaactggcatcaatgatgat
ggctgtgcgagcacagaggatggtgaaaaaaaacaaggatctgggcttgtcactgacaga
gcattagctgaagcggtgaacgcgagaactgatacgttaaccgtgtttcaggtgcagaaa
aaagcggtggccatagcgccacccaaaccgctgacaacgagtagctttgtaaggctaatg
tctggaaagctaaggcttacaacaaaagcttcaatggacgctgctcagaagctgtttgag
caaggtttaattacttaccatcgcactgatagccctgttatgtcaaaagacgcacaggag
gctgtgagagcctttgcgcggcagcaagggctgccagtgccagaagccgcaagaacggtt
aaagcgaaacaaggttcgcaagaagggcatgaatgccttcgtgtgacggatattgcgaat
acgcgaccagagctcgtcgatcagtcgttaatgaaagtttatcaattggtctggcttaca
acgctgcagtcgcagctggcaaatgcaattgatgaccggactacagtgattctgaaaaat
gggactgaggatgtattcatcgccaaaggctctgtacaaaaagaattaggctggagggcc
agcctgaaactgtcaaaggatgacagcattgaatctgaaaaaataagagggggggaagaa
aaaatagcgaagctgccaatgctcgccgaaggcgaagccgccatcgtcgaatcaacgacg
ctggaaataaaacacacgaagccacccagtgtcttcagcgaaaaaacattagtcgagaaa
ctggacaaacttaatatcggtcgcccagcgacctacgcgcaaatcattgagcgaatcaat
gagcaaggctatatcgaacgtgatactaaattaaacctcactagtactgcgctaggagaa
tgtgtcatcgatgtacttgacgggcagtattcatttttaaattacgaatacacggctgaa
ttagaatcactgtttgatcaaattgcagatcgcaaacacgagatgagttatctgcctgtt
gtggatgctgtttattcaagtcttgaatttgatagttctacgttagaagcgttggcgttg
ccgacggtgatctgtgagaaaatgaggcaggtaaaaccgaaagcaaagcctaaatctaaa
tcgaaaaaaagtggagcaaaaaagatgggtactgttgttgcgttcagttcagcgaaaaag
aacagtggtatggataagtcgagctttgtagctgggactcaatgtacgacttgtcggtca
ggcactctgagcattaaagcgttgaaaggcggtgatattatcggcaaagaatttgttgga
tgcagtgcctttccaacgtgtaaacattttcagtgggttaactaa
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