Marinagarivorans cellulosilyticus: MARGE09_P2574
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Entry
MARGE09_P2574 CDS
T07868
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
marq
Marinagarivorans cellulosilyticus
Pathway
marq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARGE09_P2574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marq03019
]
MARGE09_P2574
03009 Ribosome biogenesis [BR:
marq03009
]
MARGE09_P2574
Enzymes [BR:
marq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARGE09_P2574
Messenger RNA biogenesis [BR:
marq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARGE09_P2574
Ribosome biogenesis [BR:
marq03009
]
Prokaryotic type
rRNA helicases
MARGE09_P2574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_30
Peripla_BP_4
Cas3-like_C_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
BCD98373
UniProt:
A0AAN2BKS2
LinkDB
All DBs
Position
complement(3356215..3357996)
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AA seq
593 aa
AA seq
DB search
MTQPSQTFEQLGLNDQILKAIKHIGYETPSPIQQQAIPVMLEGRDILGQAQTGTGKTAAF
ALPILQMVDAKQHSPQVLVLAPTRELAIQVAEAFQNYAQDIKGFHVLPIYGGQGYEQQIR
ALKRGVQVIVGTPGRVMDHMRKGTLKLDGLKHLVLDEADEMLRMGFIDDVEWVLERTPQD
RQIALFSATMPKEIARVANTYLQNPQHVKIEVTTTTATTIRQRFWPVGGISKMDALTRIL
EAEKFDAVIMFVRTKTATVELAEKLEARGYSASALNGDISQNIRERTVERLKNGKIDILI
ATDVAARGLDVDRISHVINYDIPYDTEAYVHRIGRTGRAGRQGDAILFVARREMRMLRTI
ERATGKDIEQMKLPSVADINEQRQQRFKQQILDTIAGENLDIYTKLIEEMQAESPSDLIA
LAAALAKMVHGEQPLLLEDRPERAPREFKERDDRPSRDGRRRERDGREGRSKRRTESDVP
MESYRLEVGRDDGVKPGNIVGAIANEADISSQHIHNIRISENYTTVELPAGMPPALLNKL
RSVWVCQKQLQISPMTPGSNTKEHAPRKERKRPSGDRPSFEKPKTRKKRANQD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacctagccagacgtttgagcaactgggcctcaacgaccaaattcttaaagcc
attaaacacattggctacgagaccccctcccctattcaacagcaagctattcccgtaatg
cttgaaggccgtgatattttgggccaagcccaaaccggtaccggtaaaacagccgcattt
gcactgccaatactgcaaatggtcgatgccaagcaacattcgcctcaagtattagtactt
gcgccaacacgcgaacttgcaattcaggtagccgaagcgtttcaaaactacgcccaagac
attaaaggctttcacgtactccccatatatggcggccaaggttacgagcaacaaatacgt
gccttaaagcgcggcgtacaagttattgtagggactcctgggcgcgtaatggatcacatg
cgcaaaggtaccctaaagctcgatggtttaaagcacttagtactggatgaagctgacgaa
atgcttcgcatgggttttatcgacgacgtagagtgggtactcgagcgcacccctcaagac
cgccaaattgcgctgttttcagcaacaatgccaaaagaaattgcccgcgttgccaacacc
tatttacaaaacccacagcatgtaaaaattgaagtcaccacaaccacggcgaccaccatt
cgccagcgcttttggcctgtgggcggcatcagcaaaatggatgcccttacgcgcatatta
gaagcagaaaaattcgatgctgtgattatgtttgtgcgcactaaaaccgccaccgttgag
cttgccgaaaagcttgaagcgcgcggctacagcgcatcagcgcttaatggtgatatttcg
cagaacattcgcgagcgcactgttgagcgccttaaaaacggaaaaattgatatcttaatc
gcaacagatgttgccgctcgcgggctggacgttgatcgcattagtcatgttatcaactac
gatatcccatacgataccgaagcctacgtacaccgcattggccgtactggccgcgccggc
cgccaaggcgatgcgattttatttgtcgcgcgccgcgaaatgcgcatgctgcgcaccatc
gagcgcgctaccggcaaagatattgagcaaatgaaactgccatcggttgccgatatcaac
gagcagcgccaacaacgctttaagcagcaaatacttgataccattgccggcgaaaacttg
gacatttacaccaagcttatcgaagaaatgcaagccgaaagccccagcgacctaattgca
cttgcagctgcgttggccaaaatggtacacggcgagcaaccactattattagaagatcgc
ccagagcgcgcgccacgtgaatttaaagagcgtgacgatcggccatcgcgcgacggccgc
cgccgtgagcgcgatggccgagaaggccgcagtaagcgtcgcaccgaaagcgatgtaccc
atggaaagctaccgcttagaagtgggccgcgatgacggcgtaaaacccggtaacattgtt
ggcgccatcgccaacgaagccgatatcagcagccagcacattcacaacattcgcattagc
gaaaactacacaaccgttgagctacctgcaggcatgccacctgcattgcttaacaagttg
cggtcggtgtgggtttgccaaaaacagctgcaaatctcaccaatgacgccaggcagcaat
accaaagagcacgcgccccgcaaagagcgcaaacgcccttctggtgatcgcccaagtttt
gaaaagcccaaaacgcgaaagaagcgcgccaaccaagattaa
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