Marinagarivorans cellulosilyticus: MARGE09_P3659
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Entry
MARGE09_P3659 CDS
T07868
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
marq
Marinagarivorans cellulosilyticus
Pathway
marq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARGE09_P3659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marq03019
]
MARGE09_P3659
Enzymes [BR:
marq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARGE09_P3659
Messenger RNA biogenesis [BR:
marq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARGE09_P3659
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Ins_allergen_rp
Motif
Other DBs
NCBI-ProteinID:
BCD99457
LinkDB
All DBs
Position
complement(4654069..4655466)
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AA seq
465 aa
AA seq
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MSTDSTPSQQDTQMAAQDAATANTASVETAAVEPAVAAEPAPAVKRRFAEFGLEPQLLRA
IDDLGFEHCSPIQAQSLPLSLAGYDVLGKAQTGTGKTAAFLIRVIDDLLKTPPPEERYAG
EARALIVAPTRELVIQIAEDAKLLSKYTDLKIHTLVGGMDYQKQRDHLHNEFVDILVATP
GRMLDFRERQDVHLDTVELLVIDEADRMLDMGFIPQMRQIVRYTPRKTHRQTLMFSATFT
DEVVRLSEQWMHEAKNVEIAPESVATDNVEQHVYMVAGDEKFTLLYNLLNSTGFDSTMVF
ANRRDECRKLYDYLNAYGVKVGLLSGEIDQNKRVKTLDAFKNGKLNVMVATDVAGRGIHI
NDVTHVVNYTLPEEPEDYVHRIGRTGRAGSSGSSVSFACEDDSFRLPAIEELLGKKITSE
VPPEALLATLPEPQSPLPVQQKRRPQGGGGRGGNGRGRSQSRGRR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacagattcaaccccctctcaacaagatacgcaaatggctgcccaagatgccgcc
actgcaaacactgcatccgttgaaaccgcagcagttgagccagctgtagcggccgagcct
gccccagcggtaaaaaggcgttttgccgaatttggccttgagccgcaattgttgcgcgct
attgatgatttagggtttgagcactgctcgccaattcaagcgcaatcgctaccgctaagc
ctagccggttacgatgtactgggcaaagcccaaacagggacggggaaaacagccgctttt
ttgattcgcgttattgatgatctgctcaaaacaccgccgccagaagagcgttatgctggt
gaggctagggctttaattgtggcccctacccgtgagttggtgattcaaattgccgaagac
gccaagctacttagcaaatacacagacttaaaaattcacacgcttgttggtggtatggat
taccaaaagcagcgcgatcatttgcataacgaatttgtcgatatcctcgtagcgacaccc
gggcgcatgctggattttcgtgagcgtcaggatgtccatctcgatactgtcgaattgttg
gtgatagacgaagccgatcgcatgctcgacatgggctttattccacaaatgcgccaaatc
gtgcgttacacaccgcgcaaaacccaccgccaaacgctgatgttttcggccacatttacc
gatgaggttgtacgcctgtcggagcaatggatgcacgaggccaaaaatgtagagattgcg
ccagaatctgtcgcgaccgataacgtcgagcagcacgtgtatatggtcgcaggggacgag
aagttcacgctgctatacaacttgctgaattcaacggggtttgattcgaccatggtgttt
gcaaatcgccgtgacgagtgccgtaaactttacgattacctgaatgcgtacggtgtgaag
gttggcttgctcagtggtgaaatcgaccaaaacaagcgtgtcaaaaccttagatgccttt
aaaaatggcaagctaaatgtaatggttgccaccgatgtagccggccgtgggattcatatt
aatgatgtaacccacgttgttaactataccctgccagaagaacccgaagattacgtgcac
cgtattggccgcaccgggcgcgctggcagcagtggtagctcggtgagctttgcttgcgaa
gacgactcttttcgtttgccggctatcgaggagttactgggcaaaaagattaccagcgaa
gtccccccggaggctttattagctacactgcccgagccgcagagccccttgccggtgcag
caaaagcgccgcccacaaggaggcggtgggcgcggtggcaatggtcgtggtcgcagtcag
tctcgcggccgccgttaa
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