Marinagarivorans cellulosilyticus: MARGE09_P3822
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Entry
MARGE09_P3822 CDS
T07868
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
marq
Marinagarivorans cellulosilyticus
Pathway
marq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARGE09_P3822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marq03019
]
MARGE09_P3822
Enzymes [BR:
marq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARGE09_P3822
Messenger RNA biogenesis [BR:
marq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARGE09_P3822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_25
AAA_22
Phage-tail_3
Gag_p24
Motif
Other DBs
NCBI-ProteinID:
BCD99620
LinkDB
All DBs
Position
complement(4871417..4872766)
Genome browser
AA seq
449 aa
AA seq
DB search
MQFEDLGLDAAILQAVTEQGYTTPSPIQAQAIPPILEGRDVMAAAQTGTGKTAGFTLPIL
HRLSLGQKASANQVRALILTPTRELAAQVADNVQAYSTHLPLSSAVVFGGVKVNPQMMRL
RRGADVLVATPGRLLDLYQQNAVKFSQLEVLVFDEADRMLDMGFIHDIRKILRFLPTERQ
TLMFSATFSDEIRELAKSLVKNPVQVSVTPKNSTAAAVTQLIHPVDKAKKAALLTYLIKD
GDWQQALVFSRTKHGANKLTKQLDAAGITAAAIHGNKSQGARTRALAEFKQGKIRILVAT
DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGKAVSLVSADEITQLVDIER
VIGKIIERDYVGGFEPVHEVPPSPTPRAHKPKKPKKPKQHVDGQRAPGGKPPARSRSGGN
PGGARSGRPGGARPARGNSAGRSGGGNRA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaagacttaggtttagacgcagccattttacaggctgttactgagcaaggt
tatacaacgccgtcgccgattcaggcgcaggcaatccccccaattttagaaggccgcgat
gtaatggcggcagcacaaaccggcaccggtaagacagcgggctttacgcttcctatttta
catcgcctgtctttggggcaaaaagcgagcgcgaatcaagtgcgtgcgcttatcttaacg
ccaacgcgtgagctcgctgcgcaagtggccgataacgtccaagcttattcgacgcacttg
ccattaagttctgctgttgtttttggtggcgtaaaggtaaacccgcaaatgatgcgcttg
cgtcgcggggcagatgttttggtggcaacgcctgggcgcttgttagatttgtaccagcaa
aatgcggtgaaatttagccaactagaagtgctggtattcgatgaagctgatcgcatgctg
gatatggggtttattcacgatattcgtaaaattctgcgttttttacccaccgagcgccaa
acgctaatgttctcggcaacgttttcggatgagattcgtgagctcgcgaaaagcttggtg
aaaaaccctgtacaagtttctgtaacgccaaaaaattctaccgctgcggctgtaacgcaa
ttgattcaccctgtggataaggccaaaaaagcggcgttgctgacttacttaattaaagac
ggcgattggcagcaagcgctagtttttagccgtacaaaacacggtgccaataagctaacc
aagcagctagatgccgcaggtattacagcggcggccattcacggcaataaaagccagggg
gcgcgtacgcgtgctttggcagaatttaagcaggggaaaattcgcattcttgtggctacc
gatattgccgcacggggcttggatattgaccagttgccgcaagtggttaactttgatttg
ccgaatgtgccggaagattatgtccaccgtattgggcgcaccgggcgggcgggtgcttcg
ggcaaggcggtatcgcttgtgagcgcagatgaaattacccaactggtggatattgagcgg
gttattggcaagattatcgagcgtgattacgtgggtggttttgagccggttcacgaagtg
ccgccatcgccaaccccgcgtgcgcacaagccgaaaaagccaaaaaagcccaagcagcat
gtggatgggcagcgcgccccaggaggcaaaccgcctgcccgtagccgtagtggcggtaac
ccaggtggcgcacgcagtgggcgcccaggcggagctcggcctgccagaggcaattcagca
gggcgctccggcggcggtaatcgcgcatag
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