Marinagarivorans cellulosilyticus: MARGE09_P3905
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Entry
MARGE09_P3905 CDS
T07868
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
marq
Marinagarivorans cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
marq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
marq03009
]
MARGE09_P3905
Enzymes [BR:
marq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MARGE09_P3905
Ribosome biogenesis [BR:
marq03009
]
Prokaryotic type
rRNA helicases
MARGE09_P3905
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
BCD99703
UniProt:
A0AAN1WLB0
LinkDB
All DBs
Position
complement(4999851..5001242)
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AA seq
463 aa
AA seq
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MSSFASLALKPELLSNLESLNYTEMTPIQAQSLPAILAGDDVIGEGKTGSGKTAAFGLGI
LQHLEVKRFRIQTLILCPTRELAEQVAAEVRKLARAIHNIKVLCICGGMPFGPQIGSLEH
GAHIIVGTPGRIEEHLRKGSLVLNNVKNIVLDEADRMLDMGFQETLDTILGFAPKQRQTL
LFSATFPKEIESIAKRVMRSPTRIRVESQHTSETITQHFYKIDELDGNGEQQRLQAIQRL
LCDARPTSAVIFCNTKRETQAVADDLNALGFSATALHGDLEQRERDQALVRFSNKSVSIL
VATDVAARGLDIEALDAVINYQIARDSEVHTHRIGRTGRAGQKGVASTLFSGKENFKIER
LKEAHNLTVDIQPLPPAKVLAAGTYKPAMKTLQIDGGKKQKVRAGDILGALTGKDGIDGK
QVGKIQIMDNWAFVAVSAKVAKDALSKIANGKLKGRTFRVRLL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcttttgcgagccttgcgcttaaacccgagctattaagtaatctagaaagctta
aactacaccgaaatgacgcccattcaggcgcaaagcctaccggcaatattagccggcgac
gatgttattggtgaaggtaaaacaggctccggtaaaacggcggcctttggccttggcata
ttgcaacacttagaggtaaagcgctttcgcattcaaacgctaatactgtgccccacgcgc
gagctggccgagcaagtcgctgccgaggtgcgcaaattagcccgcgctattcacaatatt
aaagtgctgtgtatttgtggcggcatgccgtttgggccacaaattggctccttagaacat
ggtgcgcatattattgtaggcacgccagggcgtatagaagagcacctgcgcaaaggttcg
ttggttttaaataatgtgaaaaacattgtgctcgacgaagccgaccgcatgttggatatg
gggtttcaagaaacgctagataccatattgggctttgcgccaaagcagcggcaaacatta
ctgtttagcgcgaccttcccaaaagaaattgaaagcatcgccaaacgcgtgatgcgctcg
ccaacgcgtattcgggtagagtcccaacacactagcgaaacaatcacacagcacttttat
aaaatcgacgaattagacggcaatggcgagcagcagcggctgcaagcgatacagcgttta
ctgtgcgatgcccgccctacaagcgcggtaattttttgcaataccaagcgcgaaacacaa
gcggtcgcagacgatttaaatgcattgggttttagtgcaacggcattgcacggcgattta
gagcagcgcgagcgcgatcaagccttagttcgtttttcgaataaaagtgtttctatttta
gtggcaaccgatgttgcagcgcgagggttggatatagaagccctagatgctgttattaat
taccaaatagcacgcgatagcgaagtgcatacccatcgcattggtcgcacggggcgggct
gggcaaaaaggtgttgccagcacactgtttagcggcaaagaaaacttcaaaatcgagcgt
ttaaaagaagcgcataatttaacggtagatattcaaccgctaccgccggccaaagttttg
gctgccggcacttataagcccgcaatgaagaccttgcaaattgatggtggaaaaaaacaa
aaagtgcgcgccggtgatattttgggtgccctaacaggaaaagacggcatagatggcaag
caagtggggaaaattcaaattatggataattgggcatttgttgcggtcagtgcaaaagtg
gcaaaagatgcattgagtaaaattgccaacggtaaattaaaggggcgaacatttcgagtg
cgcttattatag
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