Marinilactibacillus sp. 15R: BKP56_07470
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Entry
BKP56_07470 CDS
T04573
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
marr
Marinilactibacillus sp. 15R
Pathway
marr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
marr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKP56_07470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marr03400
]
BKP56_07470
Enzymes [BR:
marr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BKP56_07470
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BKP56_07470
DNA repair and recombination proteins [BR:
marr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BKP56_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
API89101
UniProt:
A0A1L4BZ28
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All DBs
Position
1522545..1523384
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AA seq
279 aa
AA seq
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MPELPEVESVRRGLERLLKGKQITEVIVFWERIIAEPKEISEFKKDIQGQKIHSIDRRGK
FLLFNLTDFVLISHLRMEGKYRLEKKDTPISKYTHVIFKLDSGEELRYLDVRKFGRMSLV
SHEVVFKHPSLIKLGPEPIKEALTIETLGQELKKRKKAIKATLLDQSVIAGIGNIYADEI
LFDAKINPSRITNTLSEVEISRLTHSVLKVIDKAVKAGGTTIRTYENVFGELGTYQTSLK
VYGRTGLECVRCQTIIEKTKIAQRGTHFCPNCQKMPSER
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaattaccagaagtagaaagcgttagaagaggtcttgaacgtttattaaaaggc
aagcaaatcactgaagttattgttttttgggaacggattatagcagaacctaaagagatc
agtgagtttaaaaaagatatacaaggtcaaaaaattcattccattgatcgtagaggtaaa
tttttgttatttaacctaacagattttgttctaatttctcatcttagaatggaaggtaaa
tatagacttgaaaaaaaagatacgcctatctcaaagtatacgcatgttattttcaagttg
gatagtggagaagaattgagatatttggatgtaagaaaatttggaagaatgtctctggtc
tctcacgaagtagtttttaagcatccttcattgattaaactaggaccagaaccgataaaa
gaagctttgacaattgaaaccttgggtcaggaattgaaaaaaagaaaaaaggcgataaaa
gctacactattagatcaatctgttatagccggaattggtaatatatacgcagatgaaatt
ttgttcgatgcaaaaataaatccctctcgtataaccaatacgctctcggaagtagaaata
tccagattgactcattcagttttaaaagttatagataaagcagtgaaagctggaggaaca
acgattcgcacgtatgaaaatgtttttggagaattaggaacctatcagactagtcttaag
gtatatggtagaacaggtctagaatgtgttaggtgtcaaacaatcattgaaaaaacaaaa
attgcccaaagaggaacgcatttttgtcctaattgtcagaaaatgccaagtgaaagataa
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