Marinilactibacillus sp. 15R: BKP56_08230
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Entry
BKP56_08230 CDS
T04573
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
marr
Marinilactibacillus sp. 15R
Pathway
marr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKP56_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marr03019
]
BKP56_08230
03016 Transfer RNA biogenesis [BR:
marr03016
]
BKP56_08230
Enzymes [BR:
marr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BKP56_08230
Messenger RNA biogenesis [BR:
marr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BKP56_08230
Transfer RNA biogenesis [BR:
marr03016
]
Prokaryotic type
tRNA degradation factors
BKP56_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
DEAD
KH-I_KHDC4-BBP
Rotamase_2
SPATA25
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
API89241
UniProt:
A0A1L4BZG1
LinkDB
All DBs
Position
1678138..1680267
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AA seq
709 aa
AA seq
DB search
MSEKKIFTTEIGGRTLTAEIGQMAKQANGAALLRYEDTVVLTAAVASSHASDRDFFPLMV
SYEEKMYSVGKIPGGFIKREGRPSENATLTARLIDRPLRPMFAEGFRNEVQITNTVMSVD
PDNSPEMTAMLGSSLALSISNIPFNGPIAGVNVGRVNGELIINPTVEQNLVSDIHLTVAG
TKHAINMVESGAEQVSEEDMLEALLFGHEAIKELVAFQEKIVEEIGQDKMEIILSVPDQE
LKQEIKTVFNDKMKAAIQIFDKQERAEQTEAVKEEIINTYAEKLEDHEDKESIMKDVKAI
ASDMEKDEVRRLITQENVRPDGRKVDEIRSLESEVSILPRVHGSGLFTRGQTQALSVATL
APLNEYQIIDGLGSEDRKRFIHHYNFPQFSVGSTGPVRGPGRREIGHGALGERALAQVIP
SEEDFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVGGIAMGLVMEGDDYT
VLTDIQGLEDHLGDMDFKVAGTREGITALQMDIKIEGITKEILEEALTSAKKARLEILDN
LEAAISNPRTELSEYAPKIESIRIKPEQIKVVIGKGGDTINGIIAETGVKIDIDEEGNVS
IYGQDANGIKRAIEIIEELTEEVEVGKIYNGTVKRIEKFGAFVEIIKGKDGLVHVSELSD
KYIKNVEDVISVGDVLKVKVTEVDKMGRVNLSRKAVLEAAKSESDNDSK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaaaaatattcacaacggaaattggaggcagaacattaacggctgaaatc
ggtcagatggctaaacaagccaatggagctgctttactaagatatgaagacacggtggta
ttaactgcagcagtagcaagtagccatgcaagtgatcgtgactttttcccactaatggtc
agttacgaagaaaaaatgtactcggtaggtaaaattcctggaggattcatcaaaagagaa
ggaagaccttcagagaatgcaacattaacggcacgcctgattgataggcctcttcgtcca
atgtttgctgaaggatttcgtaatgaagtacagattacgaatacagttatgtctgtagat
cctgataattctccggaaatgacagcaatgctaggctcttctttggctttgagcatttca
aatatcccgttcaacggaccaattgccggcgtcaatgtaggtcgtgtcaatggagaattg
attatcaatccaacagtggaacaaaaccttgtttcagatattcatcttactgtggcaggt
acaaaacatgcaatcaatatggttgaaagtggagcagaacaagtatcagaagaagatatg
cttgaagctttacttttcggtcatgaagcgattaaagaattagtagcttttcaagaaaag
attgttgaagaaattggacaagataaaatggaaattattctttcagttcctgatcaagaa
ctgaaacaggaaattaaaactgtatttaatgataaaatgaaagccgctatccaaattttc
gacaaacaagaacgcgcagaacaaacagaagctgtaaaagaagaaattatcaacacttat
gcagaaaaacttgaagatcatgaagataaagaaagcataatgaaagatgtcaaagcaatc
gcttctgatatggaaaaagatgaagtacgtcgtttgatcactcaagaaaacgtcagacct
gatggacgtaaagtcgatgagataagatcacttgagtcagaagtttcaattttgccaaga
gtccatggttcaggtttgtttactcgtggacagacacaagcattgtcagttgctacatta
gcacctttaaatgaatatcagattattgacggtctaggtagcgaagacagaaaacgattc
attcatcactataacttcccgcaattttcagttggaagtactggtcctgtaagaggtcca
ggccgtcgcgaaattggtcacggtgcattgggtgaaagagctttagcccaagttattcca
agcgaggaagatttcccttatacaattcgtcttgtagcagaagtacttgaatctaacggt
tcttcatcacaagcgagtatctgtgctggaacattagcattgatggatgcaggcgtaccg
attaaagccccagttggcggtattgcaatgggattagtcatggaaggggacgattacaca
gttcttactgatattcaagggctagaagaccaccttggagatatggactttaaagttgcc
ggcacaagagaaggtattactgctctgcagatggatattaagattgaaggaatcactaaa
gaaattttagaagaagcattaacttctgcaaagaaagctcgtttagagattcttgacaat
ctggaagctgcaatctctaatcctcgtacagaattaagtgaatatgctcctaaaatcgaa
tcaatcagaattaaacctgaacagattaaagttgttattggtaaaggtggagacactatc
aatggaataattgctgaaactggtgtaaagattgatatcgatgaagaaggaaacgtttca
atttatggtcaagatgctaatggtataaaacgtgcaattgaaattattgaagaattgact
gaagaagtagaagttggaaaaatttacaacggaactgtcaaacgaattgaaaaatttggc
gcatttgttgaaatcattaaaggaaaagatggtttagtgcatgtatctgaactctctgat
aaatatatcaaaaatgtagaagatgttatttctgttggtgatgtattaaaagttaaagtt
actgaggtcgataaaatgggccgagttaacttatctagaaaagctgtcttagaagcagcc
aagtcagaatcagacaatgattctaaatga
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