Marinilactibacillus sp. 15R: BKP56_08470
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Entry
BKP56_08470 CDS
T04573
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
marr
Marinilactibacillus sp. 15R
Pathway
marr03030
DNA replication
marr03430
Mismatch repair
marr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKP56_08470 (dnaE)
03430 Mismatch repair
BKP56_08470 (dnaE)
03440 Homologous recombination
BKP56_08470 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marr03032
]
BKP56_08470 (dnaE)
03400 DNA repair and recombination proteins [BR:
marr03400
]
BKP56_08470 (dnaE)
Enzymes [BR:
marr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKP56_08470 (dnaE)
DNA replication proteins [BR:
marr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKP56_08470 (dnaE)
DNA repair and recombination proteins [BR:
marr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKP56_08470 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
SSB
Motif
Other DBs
NCBI-ProteinID:
API90313
UniProt:
A0A1L4C2M1
LinkDB
All DBs
Position
1732944..1736234
Genome browser
AA seq
1096 aa
AA seq
DB search
MSTYTLLKSTITIDKLVKAAKERGYKSIALTDHNVLYGAIEFYEKSLKAGLNPILGLTLD
IEALNEEIKEARIVLLAKNEKGFKELIKLSSKVMTEEKEIALDFLKNECSQLIAITPGAK
GEVEQLLLAGDFENAEKILYKYSEVFEELYLGYAFQTPLSSIQEQLIELSKHTNIELVAF
DAVEYLDREDAFATDVLRTIGANEMIDINKDLEQEKSLLSARERTKQYENAGLIKLAETA
DQIAEKISINITLGKPVLPKFPIPKGRKTDEYLSELCRQAVGKKIGEVTLEYKNRLEKEL
AIISKMGFSDYFLIVWDLMRYAHSQKIITGSGRGSAVGSLVSYVLDITDVDPIKYGLLFE
RFLNEERFSMPDIDLDFPDSKREQILAYVNKKYGNQHVAQIATFGTFAAKMAVRDSGRVF
GLTTKDLKRWSDAIPTSLGMTLTKAFKESSKLQSLIKESDQNQKIYETAKKLEGLPRHVS
THAAGVVISDEPLIHSVPLQLGSGELSLTQFTMSYVEKVGLLKMDFLGLKNLTILSDCIQ
FASTQTNRSLSLSNIPLNDYETLQLFRNGDTNGVFQFESPGIKRVLRKLGPTDIEDVVAV
NALYRPGPMEQIDTFIARKKGNEPIVYPHDDLEEILDVTYGIMVYQEQVMKVASKLAGYS
LAEADMLRRAISKKIRNEIDTGRKQFIRGATQKGYTEETAKNVYHYIEQFANYGFNRSHA
VAYSMVAYQLAYFKVHYPAAFYAALMKASSNNKTKLQEYVIEAKKRGVEMIGPDINMSNY
TFSLYNGTILFGLDVIKGLRRDLVYSIYKIRKEVGPYKDIIDFIGKLENKWRKEIYIKPL
VFAGAFDRLIHNRGTILHSLEGIINSVNMSNGNMELFESLAPKIELVEDLSIEEKLDQEY
EVTGFYLSNHPSEQYNKYREAFKADFIADAKTNRTMKFIGTIKGIKTIQTKKGEPMSFVE
LTDQTGSCSLTLFPEQHRKYIKYLSKGDAVLVEGKVESDQKGVKILVRKIENTKELKEIK
QKEILYLKFESIKDNEEVFQNVQSILRQHPGEVSVVIFDASTDQKHLLKKAYSIDGSKEL
VEELKEILGEKQVVLQ
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttatactttgttaaaaagtacaatcactatcgacaaacttgttaaagcagcc
aaagaacgtggctacaaatcgattgctcttactgatcacaatgttctttatggagcaatt
gagttttatgaaaaatctttaaaagctggtctgaatcctattttaggattaacactagat
atcgaggcactaaatgaggaaattaaagaagcccgcattgtattattggcgaaaaatgaa
aaaggctttaaagaactgataaaactatcatctaaagtgatgacggaagaaaaagaaatt
gctttggatttcttaaaaaacgaatgcagtcagcttattgcaatcactcctggagccaaa
ggcgaagtagaacaacttttattagcaggtgactttgaaaatgctgaaaaaatactgtat
aaatatagtgaagtttttgaagaattatatttaggttatgcatttcaaacaccactttca
agtattcaagagcagttaattgaactttctaaacacactaacattgagcttgtggccttt
gatgcagttgaatatttagatagagaagatgcttttgcgacagatgttttaagaaccatt
ggagcaaatgaaatgatagacattaataaagatctggaacaagaaaagagtcttttaagc
gctagggagagaacaaagcaatatgaaaacgcgggattgataaaattagctgaaacagct
gaccagattgccgaaaaaatatcaattaatataacgctaggaaaaccagtcttacctaaa
tttccgattcctaaaggtagaaaaacagatgaatatttatccgaactctgccgacaagca
gtaggtaagaaaatcggtgaggttactttagaatataaaaatcgacttgaaaaagaatta
gcaattatctcaaaaatgggcttttctgattattttttaattgtctgggatctgatgagg
tatgctcatagtcagaaaataattactggatcgggaagaggttcagctgttggatcttta
gtctcttacgttctagatattacggatgtagatcctataaaatacggtctgttatttgaa
aggtttttgaatgaagaacgattttcaatgcctgatattgatttagattttccagacagt
aaaagagaacaaattctagcttatgttaataagaagtatggaaaccaacatgtagcacaa
atcgctacttttggaaccttcgcagctaaaatggctgtcagagattcaggaagagttttc
ggattgacgactaaggatttaaaaagatggtcagatgcaattccgacaagtcttggtatg
acattgacaaaagcatttaaagagtcttctaaactacaaagtctgataaaagaatcagat
cagaaccaaaaaatttatgaaacagcaaaaaaactggaaggattgccaaggcatgtttcc
actcacgctgcaggggtagttatatctgatgaaccattaatacattctgtcccgctacaa
ttaggaagtggagagctttctctaacacaatttactatgtcatatgtagaaaaagtggga
ttgctgaaaatggattttcttggactgaagaatttaactatattatctgattgtattcag
tttgctagtactcagacaaatcggtcactttctctttcgaatataccgttaaatgattat
gaaacacttcaacttttcagaaatggggacactaatggtgtttttcaattcgaatcgcct
ggtattaaacgagtcctgcgcaaactggggcctacagatatagaggatgttgtagcagtt
aatgcattgtatagaccaggtccaatggaacagattgatacctttattgccagaaaaaaa
gggaatgaacctattgtgtacccgcatgatgatcttgaagagattttagatgttacgtat
ggcattatggtctatcaggaacaagttatgaaagtagcttctaaattagccggttattct
ttagctgaagctgatatgctgcgccgggcaatctcaaagaaaatccgaaatgagattgat
acaggtcgcaaacagtttataaggggagctacacaaaaaggatatacagaagaaacagca
aaaaatgtttatcattatatagaacaatttgcaaattatggattcaatcgatctcatgca
gtagcatattcaatggtagcttatcagttggcgtactttaaggtacactatccagctgcc
ttctatgcagcactaatgaaagcttcttctaacaataaaaccaagctccaagagtatgta
atagaggctaaaaagcgtggcgttgaaatgattggaccagatattaatatgagtaattat
accttttctttgtataatggaacgattctgtttggattggatgttattaaaggtctaaga
agagatttagtttattctatttataaaatcagaaaagaagttggaccatataaagatatt
attgattttattgggaagttagagaataaatggcgtaaagaaatttatataaaacccctc
gtttttgctggagcttttgatcgattgattcataatcgaggaacaattctacattcgctt
gagggaataataaatagtgtcaatatgagtaatggcaatatggaactttttgaatcatta
gcacccaaaatagaattggttgaggatctttctattgaagaaaaattggatcaggaatat
gaagtaacaggattttatctatctaaccatcccagtgaacaatataataaatacagagaa
gcgtttaaggctgattttatagcagatgcaaaaacaaatcgaacgatgaagtttattggt
acaattaaaggaattaaaactattcagaccaaaaaaggagaaccaatgtcctttgtcgaa
ttgacggatcaaactgggtcatgctctttaaccctttttccagaacaacatcgaaagtat
ataaaatatctttctaaaggtgatgctgttttggttgaaggtaaagtagaaagtgatcaa
aaaggagttaaaatcttagtaagaaaaattgagaatacaaaagaattaaaagagataaag
caaaaagaaatattatatctgaaatttgaatcgattaaagataatgaagaagtgttccaa
aatgttcagtctattcttcgacagcatcccggggaagtctccgttgttatctttgatgca
agcacagatcaaaagcatttgttaaaaaaagcctactctattgacggctctaaagaacta
gtagaagaattaaaggagattttaggtgaaaaacaggttgttttgcaataa
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