Marinilactibacillus sp. 15R: BKP56_08850
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Entry
BKP56_08850 CDS
T04573
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
marr
Marinilactibacillus sp. 15R
Pathway
marr03030
DNA replication
marr03430
Mismatch repair
marr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKP56_08850 (polC)
03430 Mismatch repair
BKP56_08850 (polC)
03440 Homologous recombination
BKP56_08850 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marr03032
]
BKP56_08850 (polC)
03400 DNA repair and recombination proteins [BR:
marr03400
]
BKP56_08850 (polC)
Enzymes [BR:
marr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKP56_08850 (polC)
DNA replication proteins [BR:
marr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKP56_08850 (polC)
DNA repair and recombination proteins [BR:
marr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKP56_08850 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
FTCD_C
HHH_3
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
API89355
UniProt:
A0A1L4BZS1
LinkDB
All DBs
Position
1812332..1816663
Genome browser
AA seq
1443 aa
AA seq
DB search
MSLNQQELFQTLLQQINLNPTPDQRIGLEGGSVESVIVHKHSKTWQITLKFADILPFETY
ILLHDQLQRGFKEIAQIELIILTSEPIVTNEKLINYWRIACKKSQVDSPLCNDIFENSYP
ELKGQKVLFYIEHELTKNKFQEDFFPKIAEQYIKMGFPKQFKIDAIIDEKISDEKLTAFK
QQKEEEDLLLAERLTKNIEQANINKEKRKEAAPSGPVKLGRNIQENDPVRQMSTIVEEER
SVTLEGYVFDVEVRELRSKRKLLIFKITDYTSSFTCKKFSNNASDEEIFENIKKGMWLKV
RGSVQEDTFMRDLVVNAQDVQETSHVEREDTQPADEKRVELHAHTTMSQMDATITAADLV
EQAAKWGHKAIAITDHGVAQSYPDAHTTGKKHNVKIIYGLEANLVDDGVPIAYNVSDDNL
PEATYVVFDVETTGLSAIYDNIIELAAVKMHKGNIIEEFQEFIDPGHPLSDTTINLTGIT
DDMVKGSKTEKQVLEEFKAFSEGSILVAHNASFDIGFLNTGYQKNEMPVSKLPVIDTLEL
SRFLHPTFKTHRLNTLAKRYGVALEQHHRAIFDSETTAHLLWAFLKEASEEYSIEIHRQL
NDYMGQGDAYKRTRPSHITILAQSQIGLKNLFKLISTSLTEYFYRVPRVPRSLLEKYREG
LIVGSGCAQGEVFEAMMQKGFDETKKLARHYDYLEIMPKGAYKHLLDREMINSEKDLEDI
ISNIVKIGEELSIPVVATGNVHYANPEDAIYRDILLETLNKGGFNKSKNPEVHFRTTDEM
LEDLSFLGKLKAKEVVVTNSQNIAASVDENISPVKHDLFTPKMEGSEQEIREMSYNEAHR
LYGDPLPEIIEKRLEKELDSIIGNGFSVIYLISQKLVHKSVNDGYLVGSRGSVGSSFVAT
MTGITEVNPMPPHYRCPGCKFSEFFTEGEVGSGFDLPPKTCPNCDQQMVTDGHDIPFETF
LGFNGDKVPDIDLNFSGEYQAKAHHYTKELFGEEYVYRAGTIGTIADRTAFGFVKGYERD
NQMTIRSAEIDRLAKGLTGVKRTTGQHPGGIIVIPEYMDVYDFTPIQYPADDQNSDWKTT
HFDFHSIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVNDPGVMQLFSGTEVLGVDE
SQIYSKTGTLGVPEFGTRFVRQMLEQTNPTTFAELLQISGLSHGTDVWLGNAEELIRQQN
IPLSEVIGCRDDIMVYLQHKGIDDSIAFQIMEHVRKGKGIPEEWQQIMRENNVPKWYIDS
CLKIKYMFPKAHATAYVLMALRVAYFKVHHPLYYYAAYFSIRASDFDLQAMSQGKASIKA
KMKEITDKGLDASTKEKNLLTVLELANEMVERGFNFKMVDIEKSHASDFIIEGDSLLAPF
RCVPSLGGSVANAIVEAREESPFLSKEDLSKRGKVSKTVIEYMDLNGVLEHLPDENQLSL
FDI
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
ttgagtctaaatcagcaagaattatttcaaacacttcttcagcaaatcaatttaaatcca
accccagatcagaggattggattagaaggcggctcagtggaatcagtgatagtccacaag
cactctaaaacttggcaaatcactttgaaatttgctgatattttaccatttgagacatat
attttgttacatgatcaacttcaaagaggctttaaagaaattgctcaaatcgaattaatt
attttaacgagtgagccgattgtgactaacgaaaaattaatcaactattggagaatagcc
tgtaagaaaagccaagttgattccccattatgtaatgatatatttgaaaatagctatcct
gaattaaagggacagaaagtgttattttatatcgaacatgagttgacaaaaaacaagttt
caagaagattttttcccgaaaatagcagaacaatatattaaaatgggatttccgaagcaa
ttcaaaattgatgcaataattgatgaaaaaattagtgatgagaagttaactgctttcaaa
cagcaaaaagaagaagaagatttattattagctgaacgattaactaaaaatattgagcaa
gctaatatcaataaagaaaaaagaaaagaagcagctccatcaggaccagttaaactaggc
agaaacattcaagaaaatgatccggttcgacaaatgagtacgatagttgaagaagaaaga
agcgttactcttgaaggttatgtttttgatgtcgaggtaagagaattgcgttctaaacga
aaattactgatattcaaaattaccgactatacctcttcctttacctgtaagaaattttcc
aataatgcttcagatgaagaaatatttgagaacatcaaaaaaggtatgtggttgaaagtt
cgaggcagcgttcaagaagatacatttatgagagatttagttgttaatgctcaagatgtt
caggaaaccagccatgtagaaagagaagatacacaaccagctgatgaaaaaagggttgaa
ttacatgcgcatacaacaatgagtcaaatggatgcaacgatcactgcagctgatttagtt
gaacaagctgctaaatggggacataaagctattgcaattaccgaccacggtgtcgcacaa
tcttatccagatgctcataccacaggcaagaagcacaatgttaaaatcatttatgggcta
gaagcaaaccttgttgatgatggagttccaattgcttataacgtttcagatgataacctt
ccggaagctacatatgtagtatttgatgtggaaacgacaggattatctgctatctatgat
aatataatagagttggcagctgttaaaatgcataaaggcaatattatagaagaatttcag
gagtttattgacccaggtcatcctttatctgataccacaatcaatcttactggaataaca
gatgatatggttaaaggttctaaaacggaaaaacaagtactagaagagttcaaggctttt
agtgagggttcgatattagtcgctcataacgccagctttgatataggatttttgaataca
ggttatcagaaaaatgaaatgcctgtttccaagcttccggtaattgacacgctagaactt
tctagatttttacatccgacatttaaaacacaccgcctgaatacattggcgaagcgttat
ggtgtggctttagaacagcatcatagggctattttcgattctgaaacgaccgcacattta
ctttgggcgtttcttaaagaagcttcggaagagtactcaattgaaatccatcgtcaacta
aacgattacatgggccaaggtgatgcttacaaaagaacacgacctagtcatattacaata
cttgcacaatcacaaattggattgaaaaatctatttaaattaatttcaacttctttaact
gaatatttctatagagttcctcgagtaccaagatctctacttgagaaatatagagaaggt
ctgattgtaggttctggatgtgctcaaggtgaagtgtttgaagcgatgatgcaaaaagga
tttgatgaaacaaaaaaattagctagacattatgattatcttgaaattatgcctaaaggt
gcttacaaacatctattagatcgtgaaatgataaattctgaaaaagatttagaagatatc
atatcaaacattgtgaaaattggggaagaattatctatacctgtagttgctactggtaat
gtacattacgcaaaccctgaagatgcaatttaccgtgatatactacttgaaactttaaac
aaaggcggctttaataagtctaaaaatcctgaagttcattttagaacgactgatgaaatg
ctagaagacctatctttcttaggtaaattaaaagctaaagaagttgtagttacgaattct
caaaatattgctgctagtgttgatgaaaacatttcaccggttaaacacgacctgtttact
cccaaaatggaaggatcagagcaagaaatccgtgaaatgagttataacgaagcacaccgg
ttatacggagatccactacctgagattattgaaaaacgattagagaaagaactggacagt
attataggtaatggattttctgtaatttacttgatatctcaaaagttagttcataaaagc
gtaaatgatggatatcttgttggatcacgtgggtcagttggatcaagttttgtagcaact
atgacgggaataactgaagtaaatcctatgccacctcattatcgctgtcctgggtgtaaa
ttttctgaattcttcactgagggcgaagtaggatcaggatttgacttaccaccgaagacc
tgtccaaattgtgatcagcagatggtaactgacggacatgatattccttttgaaactttc
ttaggctttaatggagacaaagttcctgatattgatttgaatttttcaggagaatatcaa
gctaaagcccatcattatacaaaagagttatttggagaagaatatgtctaccgggctgga
acaattggcactatagcagatcgaacggcttttggatttgttaaaggatatgagagagat
aatcaaatgacaattcgttcggctgagattgatagactagctaaaggattaactggagtc
aagagaactacaggccaacatccaggaggaattatcgtaattcctgaatatatggatgta
tatgactttacaccaattcaatatccagcagatgatcagaattcagattggaagacaact
cactttgactttcattcaatccatgataacgttttaaaattagatatattaggacacgat
gatcctacgatgattcgaatgctccaggatctgtcaggtatagaccctaaaacaatacca
gttaacgatccgggtgtaatgcagcttttcagcggtacagaagtattaggggtagatgaa
agtcagatatattcgaaaacaggcacacttggcgttcctgaattcggaacgcgatttgtt
cgccaaatgctggagcaaacgaatccaacaacttttgcagagttactacagatctctggt
ttatctcatgggacagatgtatggcttggaaatgctgaagagttgattcgccaacagaat
ataccactatcagaagttattggctgtcgagatgatatcatggtttatctgcagcacaaa
ggaatcgatgatagtattgcttttcagattatggaacatgttcgtaaagggaaaggaata
cctgaagaatggcagcagatcatgcgtgagaataatgtaccgaaatggtatattgattca
tgccttaaaattaaatatatgtttcctaaggctcatgctacagcatatgttttaatggca
ttacgagtagcttattttaaagtacatcatcctttatattattacgctgcttacttttct
attcgtgcaagtgattttgatcttcaagcgatgagtcaaggaaaagcttcaataaaggca
aaaatgaaagaaataacagataaagggttagatgcttcgacaaaagaaaaaaatctacta
actgtgcttgaattagcgaacgaaatggttgaaagaggatttaacttcaaaatggtagat
attgaaaaatcacatgcttcagattttattattgaaggggattctttactagctcctttt
cgatgtgtaccttcattaggtggaagcgtagcaaatgcaattgttgaagcgagagaagaa
agtccatttctttctaaggaagatctttcaaaaagaggaaaagtatctaaaacagtaatt
gagtatatggatttaaatggtgtattagaacatctcccagacgaaaaccaattatcttta
tttgatatttaa
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