Marinilactibacillus sp. 15R: BKP56_09910
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Entry
BKP56_09910 CDS
T04573
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
marr
Marinilactibacillus sp. 15R
Pathway
marr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
marr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BKP56_09910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marr03021
]
BKP56_09910
Transcription machinery [BR:
marr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKP56_09910
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Pox_RNA_Pol_19
DUF4810
Motif
Other DBs
NCBI-ProteinID:
API89550
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All DBs
Position
complement(2015197..2016333)
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AA seq
378 aa
AA seq
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MAKTKKEVNNVQPSKKYEAAVKELIKETKKKMEQTISYVELTDKLAEPFELEKNQMDNLI
QKFEDEGVGVVDEDGNPLAKQLDKEEEVVEEAKKEEMIAPPGVKINDPVRMYLKEIGRVD
LLSAKEEITLAKRIENGDIIAKQELAEANLRLVVSIAKRYVGRGMSFLDLIQEGNMGLMK
AVEKFDYEKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRIQRQLLQDL
GREPTPEEIGAEMDLPTEKVRDILKISQEPVSLETPIGEEDDSHLGDFIEDNEATSPADN
AAYELLKSELEDVLDTLTDREENVLRLRFGLDDGRQRTLEDVGKVFGVTRERIRQIEAKA
LRKLRHPSRSKQLKDFLE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaactaaaaaagaagtaaataatgttcaaccaagcaaaaaatatgaagcagct
gtaaaggaattgattaaagaaacgaaaaagaaaatggaacagacaatttcttatgttgaa
ttaaccgataaactagctgagcctttcgaactcgaaaaaaatcaaatggataatttgatt
cagaaattcgaagatgagggtgttggagtcgttgacgaagacggtaaccctctagcaaaa
cagttagacaaagaagaagaagtcgttgaagaagctaagaaagaagaaatgattgctcct
cctggtgttaaaataaatgatcctgttagaatgtaccttaaagaaattggtcgagtagac
ctattaagcgcaaaagaagaaataactttagcaaaaagaatcgaaaatggagacattatt
gctaaacaagaattagcggaagccaacttacgattggttgtttctattgctaagcgttat
gttggacgtggaatgagctttttagatctaattcaagaaggtaacatgggattaatgaaa
gctgttgaaaaatttgattatgaaaaagggttcaaattttcaacttatgctacctggtgg
attagacaagctataacccgtgcaattgctgaccaggcaagaacgattcgtataccagtt
catatggttgagacaatcaataaactcgtccgtatccagcgtcaattacttcaggattta
ggaagagagcctacacctgaagaaattggagcagaaatggacttgccgactgaaaaagtt
agagatattttaaaaatctctcaagaaccggtatctcttgagacaccaatcggcgaggaa
gatgattcgcatctgggagactttatagaagataatgaagcaactagtcctgctgataat
gctgcttatgaactattaaaaagtgaattagaagatgtattagatacattaacagatcgt
gaagaaaatgtattgagacttcgtttcgggttagatgatggacgtcagagaacacttgaa
gatgtaggtaaagtgttcggtgtaactagagaacgtatcaggcagatagaggcgaaagca
cttagaaagcttcgtcatccaagtcgctcaaaacagttgaaagacttcctagaataa
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