Marinilactibacillus sp. 15R: BKP56_10065
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Entry
BKP56_10065 CDS
T04573
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
marr
Marinilactibacillus sp. 15R
Brite
KEGG Orthology (KO) [BR:
marr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marr03019
]
BKP56_10065
03009 Ribosome biogenesis [BR:
marr03009
]
BKP56_10065
Enzymes [BR:
marr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BKP56_10065
Messenger RNA biogenesis [BR:
marr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BKP56_10065
Ribosome biogenesis [BR:
marr03009
]
Prokaryotic type
rRNA helicases
BKP56_10065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_RecD
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
API89580
UniProt:
A0A1L4C0F1
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All DBs
Position
complement(2042440..2043753)
Genome browser
AA seq
437 aa
AA seq
DB search
MTHPFEQYNLKPYLIEAIKEIGFQEPTEIQRKVIPEIKKGRDIIGQSQTGSGKTHAFLLP
LFNQIDPSREQVQIVITAPSRELSDQLFQAASQLAAHSEEEIIVQQFIGGTDKQRQIDKL
TQKQPHVAIGTPGRMNDLVKQNALLTHTASYMVVDEADMTLEMGFLEEVDQIAARLPENG
QMLIFSATIPQSLQPFLKKYMKNPINIVIENQQVISDRVENWLISTKGKKRVDVIHQLLT
LGQPYLALVFANTKDKVDEIAKGLGDRGLDVAVVHGGISSRERRRVMRQIQNLDYQYVVA
SDLAARGIDIKGVSHVINAEIPHELDFFIHRVGRTGRNGMDGIAVTLYSPGEEKAIETLE
SMGISFQPKEVKQGEVIDTHDRNRREQRKDQNSKEAFDSEIHGMRKKAKKNVKPGYKRKI
ERKKEEKRRKARKLNKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacacacccatttgaacaatataatttgaaaccataccttatcgaagcaataaaagaa
atcggctttcaagagccaactgaaattcaaagaaaagttattcctgaaattaaaaaggga
agagatattataggccagtcacaaactggatcaggtaaaacccatgcatttttacttcct
ttattcaatcaaattgatccaagtagagaacaggttcaaattgtaattactgctccaagt
agagaactatctgatcagttatttcaagcagcaagtcaattagctgctcattctgaagaa
gagattattgttcagcaatttattggtggtactgataaacaaaggcaaatcgataaatta
actcaaaaacaaccacacgttgcaatcggaacacctggacggatgaatgatctagtaaaa
cagaatgctttgttgactcacacagcaagttatatggttgtggatgaagctgatatgacg
ctagaaatgggattcttagaagaagtagaccagattgctgccagattaccagaaaatgga
caaatgcttattttttctgccacgattccacagagtttacagcctttcttaaagaaatat
atgaaaaatccaatcaatattgtaattgaaaatcagcaagttatttctgatagagttgaa
aattggctgatttcgactaaaggaaaaaaacgtgttgatgttatccatcaactactaaca
ctcggacaaccttatctcgcactggtatttgctaatacaaaagataaagtagatgaaatt
gctaaaggtctgggagatagagggcttgatgtagcggtcgtacacggtggtatttcttct
cgagaacgcagacgagtcatgagacaaattcagaatttagactatcaatatgtggtagca
tctgatcttgcagctagaggaatcgatatcaaaggagtttctcatgttatcaatgcggag
attcctcatgaattagacttctttattcacagagttggcagaacaggtcgtaacggaatg
gatggtattgctgttactttgtattctcctggtgaagaaaaagcaatcgagacccttgaa
agtatgggtatcagtttccagcctaaagaagttaaacaaggcgaggtaatcgatactcat
gatcgtaaccgaagagaacagcgcaaagatcagaatagtaaagaagcttttgactctgaa
attcatggtatgcgcaaaaaggcaaagaaaaatgtaaaacctggatataaacgaaaaatt
gaacgtaaaaaagaagaaaaaagaagaaaagctagaaaattaaataaaaaataa
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