Marinobacterium aestuarii: A8C75_07195
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Entry
A8C75_07195 CDS
T04398
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mars
Marinobacterium aestuarii
Brite
KEGG Orthology (KO) [BR:
mars00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mars03019
]
A8C75_07195
Enzymes [BR:
mars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A8C75_07195
Messenger RNA biogenesis [BR:
mars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A8C75_07195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
HA2_N
AAA_25
nSTAND3
ResIII
RsgA_GTPase
ABC_tran
NACHT
SLFN-g3_helicase
TsaE
AAA_23
NTPase_1
PhoH
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANG62298
UniProt:
A0A1A9EXA4
LinkDB
All DBs
Position
1619602..1623519
Genome browser
AA seq
1305 aa
AA seq
DB search
MTIDIEHLRQQLALCQCKDRLGLLRKFQQLEQRLEKGLPADRIAIQLEQALEHSAAQVKA
RAARVQSINYPDLPVSARREEIAKVIAANQVVVIAGETGSGKTTQIPKICLELGLGVRGL
IGHTQPRRLAARTVATRIAQEMNCSLGDQVGYQVRFTEQVSDHTLIKLMTDGILLAETQH
DRLLERYDVIIIDEAHERSLNIDFLLGYLKRILPQRPDLKVIITSATIDLERFSRHFDDA
PIIEVSGRTYPVEVLYRPLNDRGEDQPDVDQQQAILEAVEEITDLGRSQRSNSARDILIF
LSGEREIRETAEVLRRAQLRDTEVMPLYARLSVAEQNRVFQADRGAGRRIVLATNVAETS
VTVPGIGYVIDPGQARISRYSYRAKVQRLPIEAVSQASANQRMGRCGRISAGICIRLYSQ
EDFEARPRFTDAEIRRTNLAAVILQMLSLRLGDIADFPFIDPPDSRFISDGFKLLEELGA
VDTGRGMTALGRQLAQLPVDPRIGRMVLEGAKQNALREVLVVASALSSQDPRERPLDKQQ
AADEKHREYADDESDFVTLLKLWNLYEEQRQSLSQNQLRKYCQKHFLSFLRMREWRDVHR
QLHLICRQLKLQENSIAAEYEPFHKSLLAGLLSQIGMRQENREYLGARNRRFHLFPASTI
FKKAPKWVMSAEMVETSRLFARMNAAIKPEWVEPLAGHLVKRSYLEPHWEKKRAQVVASE
QVTLFGLIIVPRRKIHYGTIDPVACHEIFIRSALVEGEYQTQAKYFSHNRTLLDGVEALE
AKSRRRDLLVDEDSLYDFYAGRLAESGGADIVNGAGFEHWRKSAEQQNPQVLFFTEADVL
QRSAAHVTARDYPQRMRLEGVDLPLNYQFEPGTASDGVTLDLPLALLNGVTPRRPDWLVP
GMLQDKCIAILKGLPKPLRKHFVPIPDHVRAFTDQVVFADGDLYEALSLFLRRKTGVRLD
PAKLRAVELDKHFRMNIRLLDAAGQQLGAGRDLETLSSEFGKQAEAALREGPGDSWGRSG
LTRWDFGELPESVELRQAGGIRVAAYPGLRDCGASVELHICASADQAQAESRQGVARLAM
LELAAPVRYARREMPHLNEALLYGGAQFDKTRLADAILMQALMQLMQLDESLPRSESDYR
ARLEQARAVLWEKVVQLAGFVRDCHRDYHQVRKQLGGNIPLQAVTVLNDIKSQLSELMQA
EYLLTTPWPQLQHYPRYLQAILKRLEKYQRDLNRERLLSDQLQQYWQRYKGLRDKNKAQG
LFDPALEEYRWMLEEYRVSLFAQALGTQVAVSDKRLQQQWRQLQA
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
gtgactatcgatattgaacatcttcgtcagcagcttgcgctctgccagtgcaaggatcgc
cttggtcttctcagaaagtttcagcagctggaacagcgcctggaaaagggcttgccggcg
gatcgcatcgcgatccagctggaacaggcactggaacactcagcggcgcaggtaaaggcg
cgcgctgcgcgggtccagagcattaattaccccgatttgccggtatcagcgcggcgcgag
gaaatcgccaaggtgatcgccgccaatcaggtggtcgttattgccggtgagacaggttcc
ggcaagaccactcagatacccaagatctgcctggagctgggcctgggcgtgcgtggcctt
attggtcacacccagccgcggcgcctggccgcgcgcactgtggcgacgcgcatagcgcaa
gagatgaattgcagcctgggtgaccaggtgggctatcaggttcgcttcaccgagcaggtg
tctgaccataccctgatcaagctgatgaccgacggtatcctgctggcggaaacgcagcac
gaccggttgctggagcgctatgacgtcatcattatcgatgaagcccatgagcgcagtctc
aatatcgactttctgctgggatacctgaaacggattctgccgcagcgcccggaccttaag
gtcatcatcacctcggccactatcgatctggagcgtttctcgcgccactttgatgacgca
cccattattgaggtttcggggcgcacctacccggttgaagtgctctatcgcccgctgaat
gatcgcggtgaagaccagcccgatgtagaccagcagcaggcaattctggaggcggtggag
gaaatcaccgatctggggcgcagtcagcgcagcaacagcgcgcgggatattctgattttt
ctcagtggcgagcgggaaatccgcgaaacggccgaagtgctgcgccgggcacagttgcgt
gataccgaagtcatgccgctctatgcgcgcctgagcgtggcggagcagaatcgggtgttt
caggcggatcgtggtgcaggcaggcgcatagtgctggccaccaacgtggcggaaacctcg
gtcacggtcccgggcatcggttacgtcattgatcccggccaggcccgtatttcgcgttac
agctatagagccaaggtacagcgtctgccgattgaagcggtgtcccaggccagcgccaat
cagcgcatggggcgctgcggtcgcatctccgcgggtatctgcattcgactttattcgcaa
gaggatttcgaggcccgaccgcgctttaccgatgccgagatccggcgtaccaatctggcc
gcggtcatcctgcagatgctcagtctgaggctgggtgatatcgccgacttcccctttatc
gatccaccggacagccgctttatcagtgacggcttcaagctgctcgaagagctcggtgct
gttgatacggggcgcggcatgacggcactcgggcgtcagctggcacagttgccggtggac
ccgcgcatcgggcgcatggtgctggagggggccaagcagaatgcactgcgcgaagtgctg
gtggtggccagtgcgctgagcagccaggatccgcgtgagcgcccgctcgacaagcagcag
gcggcggatgagaaacaccgggaatacgccgacgatgaatcggattttgtcaccctgctc
aagctgtggaatctgtatgaagagcagcgccagagcctgagtcagaatcagctgcgcaaa
tactgccagaagcactttctgtcatttttgcgcatgcgcgagtggcgcgatgtgcatcgc
cagctgcacttgatttgccggcagttgaagctgcaggaaaactcgattgcggcggaatat
gagccgtttcacaagtcgctgctggccgggctgctgagccagattggcatgcgacaggag
aatcgggaatatctgggggcgcgcaaccgccgctttcatctgtttccggcttcgacaata
ttcaagaaggcgcccaagtgggtgatgtcggcggaaatggtcgagacatcgcgcctgttt
gcccgcatgaatgcggcgatcaagcctgagtgggtcgagccactggccgggcatctggtc
aagcgcagctatcttgaaccgcactgggagaaaaaacgcgcccaggtcgtggccagcgaa
caagtcacgctctttggtctgatcatagtaccgcgacgcaagatccattacggcaccata
gatccagtcgcctgccacgagatcttcattcgcagtgcgctggtggaaggggagtaccag
acccaggcgaagtatttcagccacaaccgcacactgctggacggggtggaggcgctggaa
gccaaaagccggcgccgcgacctgctggtggatgaggacagtctgtacgacttctatgcc
ggacgcctggccgagagtggtggcgcggatatcgttaacggtgcgggctttgagcactgg
cgcaagagcgccgagcagcagaaccctcaggtgctgttctttactgaggcagacgtattg
cagcgctcggcggcccatgtgacagcgcgggactatccgcagcgcatgaggctggaaggc
gtcgacctgccgcttaactatcagttcgaacccggcaccgccagtgacggcgttacgctc
gatctgccgctggcactgttgaacggggtaaccccgcggcgccccgactggctggtaccc
ggcatgctgcaagacaagtgcattgccatccttaaaggcttgcccaagccgctgcgcaag
catttcgtgccgattccggatcatgtgcgggccttcaccgatcaggtggtgtttgccgac
ggtgatctgtacgaggcgctcagcctgtttttgcggcgcaaaaccggtgtgcgcctggac
ccggccaagttgcgcgccgtcgagctggacaagcacttccgcatgaatattcgtttgctg
gatgcggccggtcagcagttgggtgccgggcgggacctggagacgctctcaagtgaattt
ggcaagcaggccgaagctgcgttgcgtgaagggccgggggatagctggggtcgcagcggc
ttgactcgctgggatttcggagagctgcctgagtctgtggagctgcgccaggccggcggc
atccgcgtggcggcctatcctgggttgcgggactgcggcgcaagtgtcgagctgcacatc
tgtgcctcggcggatcaggcgcaggcggaatcgcgccagggcgttgcccggcttgccatg
ctggagctcgcggcgccggtgcgctatgcgaggcgcgagatgcctcatctaaatgaagca
ctactgtacggcggtgcccagtttgacaagacgcggttggcggatgccatcctgatgcag
gcgctgatgcaattaatgcagctggatgagtcgctgccgcgctcagagtcggattacagg
gcgaggcttgagcaggcgcgtgcagttttatgggaaaaggttgttcaactggccgggttt
gtacgcgactgtcaccgggattatcaccaagtgcgcaagcagctgggcggaaacatcccg
ctgcaggcagtaacagtactgaatgatataaaaagtcagctttcggagctgatgcaggct
gaatatttgctgactaccccctggccgcagttgcagcattacccgcgttatctgcaggcg
attctgaagcggctggaaaaataccagcgagaccttaatcgggagcggttattatctgac
cagttgcaacagtactggcagcgctataaaggtttacgcgacaaaaataaggctcagggt
ttgtttgacccggcgcttgaagagtatcgctggatgctggaagagtaccgcgtctcgctt
tttgcccaggcgctgggtacccaggtcgcagtatcggacaagcggctgcagcagcagtgg
cgccagttgcaggcgtga
DBGET
integrated database retrieval system
