Marinobacterium aestuarii: A8C75_08640
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Entry
A8C75_08640 CDS
T04398
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mars
Marinobacterium aestuarii
Pathway
mars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8C75_08640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mars03019
]
A8C75_08640
03400 DNA repair and recombination proteins [BR:
mars03400
]
A8C75_08640
Enzymes [BR:
mars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8C75_08640
Messenger RNA biogenesis [BR:
mars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8C75_08640
DNA repair and recombination proteins [BR:
mars03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A8C75_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
HTH_40
ResIII
Sigma70_r4_2
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ANG62547
UniProt:
A0A1A9EXG1
LinkDB
All DBs
Position
1951446..1953569
Genome browser
AA seq
707 aa
AA seq
DB search
MMEHALRVLKDVFGYDQFRTPQEDVISRLVGGQDLLVVMPTGGGKSLCYQLPALLRDGTA
VVVSPLIALMQDQVSALSQWGIRAGCLNSAVSFEERSRTEDALRSGELDLLYIAPERLLQ
PRTLDLLSHCTLALFAIDEAHCVSQWGHDFRPEYLQLSRLRERFPGVPRIALTATADGRT
QQEIVERLQLDQAVRFIQGFDRPNIRYRIGQKDKAKDQLLRFLRDEHPQDAGVVYCLSRK
KVEATAAWLCERGFNALPYHAGLSTELRAHNQHRFLTEESLIMVATIAFGMGIDKPNVRF
VAHLDLPKSIEAYYQETGRAGRDGMPADAWMVYGLQDVIFLRQMLEGSQAPEQQKQIERQ
KLEAVLGLCEITSCRRQTLLAYFGESEHAPCGNCDTCLEPVPVWDGTEAARKALSAVYRS
GQHFGVNHVIDILLGSNSEKLRERGHDRLSTFGIGKDLDRNQWRSVFRQLVARGFLGVDG
QGHGVLHLTEACRGVLRSEQTLELRLESRSQSRFTRSSVPQSKLEASDYALWNDLRAARK
TLAETQDVPPYVIFHDATLMEMVMHRPLNEVQLRRLNGVGERKLELYGKQFLAVIEQHEQ
AGQTQAVASDEALLLFRSGMTVQQVALQLKLSVNAIFGQLARAIQQGQLEMAEVVELPQA
EVSHIQQVMIECERDFGAALKPVHEALGGAYDMGLLRCVRVGLSLDR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacacgcacttcgagtactgaaagacgtttttggctatgaccagtttcgcact
ccccaggaagacgtaatcagccgtctggtgggcggtcaggatttgctggtggtcatgccg
accggtggcggcaagtcactgtgctaccagttgccggcgctgctgcgcgacggtacagcc
gtggttgtgtcacccttgattgcactgatgcaggatcaggtcagtgccctgtcgcagtgg
ggcattcgtgccggctgcctcaattcggcggtgagttttgaagaacgcagccgtaccgag
gatgcactgcgcagtggcgagctggatctgctctatatagcgccagaacgactgctgcag
ccgcgtacactggatctgctgtcgcactgcaccctggcgctttttgctatcgacgaagcg
cattgcgtgtcgcagtgggggcatgacttcaggcccgaatacctgcagctcagtcgcctg
cgcgagcgctttcccggcgtgccgcgcatcgccctcaccgccaccgcagatggacgcact
cagcaggaaatcgtcgaacggctgcagcttgatcaggccgtgcgctttattcaggggttt
gatcgtcccaatatccgttatcgcattggtcagaaagacaaggcaaaggatcagctgctg
cgctttctgcgcgatgagcatccgcaggatgccggcgtggtgtattgcctgtcgcgcaaa
aaggtcgaggctacagctgcctggctgtgcgagcgcggcttcaatgcactgccttaccat
gccgggctctcgacggagctgcgggcgcataaccagcaccgttttctgaccgaagaaagt
ctgatcatggtggcgaccatcgcctttggcatggggatcgacaagcccaatgtgcgtttt
gtagcgcacctggatttgcccaaaagcattgaagcctactatcaggaaaccggccgcgcc
gggcgtgatggcatgcccgccgatgcctggatggtgtatggcctgcaggatgttattttt
ctgcgccagatgcttgaaggttcccaggcccccgagcagcaaaaacagattgaacgccag
aagcttgaagccgtactgggattgtgtgaaatcaccagttgccggcgtcagacgctgctg
gcgtacttcggtgagtctgagcatgcgccctgtggcaactgcgatacctgccttgaacct
gtgcctgtttgggatggcactgaagcggcgcgcaaggcgctgtcggcggtgtatcgctcg
ggccagcacttcggcgtcaatcatgtcatcgatatcctgctgggcagcaatagtgaaaag
ctgcgagagcgcgggcatgatcgcctgtcgacctttggtattggcaaggatctggaccgc
aatcagtggcgctcggtgtttcgccagctggtggcgcggggctttctgggggtggatggc
caggggcatggcgtgctgcacctgaccgaggcctgtcgcggggtgctgcgcagcgagcag
acactggagctgcggctggagtctcgcagccagagccgctttacccgcagctcggtgccg
cagtcgaaactggaagccagtgactatgctctgtggaatgacctgcgggccgcgcgcaag
acgctggccgaaacccaggacgtgccgccctatgtgattttccatgatgccaccctgatg
gaaatggtcatgcaccggccgctgaatgaggtgcagctgcgcaggctcaacggtgtgggg
gagcgcaagctggagctctatggcaagcagttcctcgcggtcatcgagcagcatgaacag
gccggccagacgcaggcggtagcctcggatgaagctctgctgctgtttcgcagtggcatg
acggtacagcaggttgcgctgcagctcaaattgtcggtcaacgccatctttggtcagctg
gcacgggccattcagcaggggcagctggagatggcggaagtggtcgagttgccgcaggcc
gaagtcagccacattcagcaggtcatgattgagtgtgagcgtgatttcggtgcagcgtta
aaaccggtgcatgaagccctgggcggtgcctatgacatgggcctgctgcgctgtgtgcgc
gtggggctgagccttgatcgctga
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