Marinobacterium aestuarii: A8C75_09180
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Entry
A8C75_09180 CDS
T04398
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mars
Marinobacterium aestuarii
Pathway
mars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8C75_09180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mars03019
]
A8C75_09180
03009 Ribosome biogenesis [BR:
mars03009
]
A8C75_09180
Enzymes [BR:
mars01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A8C75_09180
Messenger RNA biogenesis [BR:
mars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A8C75_09180
Ribosome biogenesis [BR:
mars03009
]
Prokaryotic type
rRNA processing factors
A8C75_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Prenyltransf
Motif
Other DBs
NCBI-ProteinID:
ANG62637
UniProt:
A0A1A9EXN9
LinkDB
All DBs
Position
complement(2087850..2091191)
Genome browser
AA seq
1113 aa
AA seq
DB search
MLINATQPEELRVALVDGQRLYDLDIESSNREQKKANIYKGKITRVEPSLEAAFVDYGAD
RHGFLPMKEISRDYFSKQPEKGGRPNIKDVLKEGTEVIVQVEKEERGNKGAALTTFISLA
GRYLVLMPNNPRAGGISRRIEGDERSQLKEALSGVDVPEKMGIIIRTAGVGRTSEELQWD
LNYLATLWEAITEAGTKRNAPFLVYQESNVVIRAIRDYLRNDIGEVLIDSDKVFDEARQF
IRHVMPSFESKIKLYKEQTPLFNRYQIESQIETAFEREVTLPSGGSIVIDPTEALVSIDI
NSARATRGSDIEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTPIKNQRAVEDRLA
DALKLDRARVQMGRISRFGLLEMSRQRLRPSLAESRGTVCPRCNGQGSIRDTESLALSIL
RLIEEESSKDRTSQIRAILPVTAATYLLNEKRHEVHEIELRHQVRIVIVPNPNMETPHYE
VVRLRDDHTVATTNDASYSLQPPPKQEEFTASAAKVVKREEAAVQGIAPASPAPAAAPEP
APAPKPAAAAPAPARTQRAPAAAKPAAAAPAAPAAAPVSLGTKLAGFIKGLFGDTPKPEP
EPTPLPEIRQGRAPSQNREERNRPAQERSNSNKPKRRRDSRDNDRRRRSQQDSDEIITIT
PQQADSAPAPSSSAEEQSGSSKPRRRRSRSRKNDSDESRNERSARSAETSEEQQLEQNDT
RVKQPDVVSPSETDDTPKAKPAAEKREARDNSAEDSETRGRRRGRRRRGSDRVAERTGTD
ADATATVAATAVAAETMQQNASESTADKVTATAVQDAPAIAESTETQTAASDEANQNATV
ASGDTQNDATAPQAEAEASTTEAPAPAESAETAAEEAPVAETAAQSAAQAEEPVQEDAAE
AQKASTEATTEAPEVVTEAATDAAEETATDTVEVETVSAEVLAEPAATEEAAQQAEAEQA
TAVTPAQSDSAVEASADTAAEAAEVTASPDTTEAEKAAEAEKAAPVEAAEAAEAETAETV
TDVVAEAAPAAETTAVEVEAAAETTEVQAPEEATEEPTEAAVAEPAIDTAVAPAAQQPAP
RRRRRSGRAPNDPREKRRSQQKAQDENVENQHS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgctaattaacgcaactcagccagaagagttgcgggtcgccctcgttgacgggcagcgg
ctttatgatctggatatagagtcatccaaccgtgagcagaaaaaggccaacatctacaag
ggcaaaatcacccgtgtagagccgagccttgaagcggccttcgtcgactatggcgccgat
cgtcacggcttcctgcccatgaaggaaatctcccgcgactacttcagcaagcagcccgaa
aaaggcggccgtccgaacatcaaggatgtgctgaaggaaggcaccgaagttattgttcag
gttgaaaaagaagaacgtggcaacaagggcgcagccctcaccaccttcatcagcctggcc
ggtcgctacctggttctgatgcccaacaacccccgtgccggcggcatttcccgccgtatc
gaaggggatgagcgcagccagctgaaagaagccctgtccggcgtcgatgtgcccgaaaag
atgggtatcatcattcgcaccgcgggtgtcggtcgcacctcggaagagctgcagtgggac
ctgaactacctggccaccctgtgggaagccatcaccgaagccggcaccaagcgcaacgcg
cccttccttgtttatcaggaaagcaacgtcgttatccgtgcgatccgcgactacctgcgc
aacgatatcggcgaagtgctgatcgacagtgacaaggtgttcgacgaagcccgccagttc
atccgccatgtgatgccgagcttcgaaagcaagatcaagctctataaagagcagacgccg
ctgttcaaccgctaccagatcgagtcccagatcgaaacggcctttgagcgcgaagtcacc
ctaccctccggcggctctatcgtgatagacccgaccgaggccctggtatccatcgatatc
aactcggcccgcgctacccgtggcagcgatatcgaagaaacggcactcaacaccaacctg
gaagcggcggaagaaatcgcccgccagctgcgtctgcgtgatatcggcggcctggtggtc
atcgatttcatcgacatgacaccgatcaagaaccagcgtgcggtggaagaccgtctggct
gatgccctcaagctggaccgcgcccgcgtccagatggggcgcatctcccgctttggcctg
ctggaaatgtcgcgtcagcgtctgcgtccgtcactggccgaatcccgcggcaccgtgtgc
ccgcgctgcaacggacagggctccattcgtgataccgaatccctggccctgtcgatcctg
cgcctgatcgaggaagagtcctccaaggaccgcacgtcccagattcgcgccattctgccg
gtcacggctgcaacctacctgctgaacgaaaaacgtcacgaagttcacgaaatcgaactg
cgccatcaggtacgcatcgtcatagtgccgaatccgaacatggaaacgccgcactatgaa
gtcgtgcgcctgcgtgatgaccacaccgtggccaccaccaacgacgccagctacagcctg
cagccaccgcccaagcaggaagagttcaccgcctctgctgccaaggtcgtgaagcgcgag
gaagccgctgtacagggcatagctcccgcctccccggcaccggctgcagcgcctgaaccc
gcgcctgcgcccaaaccggcagccgcagcgcctgcaccagcacgcacccagcgcgcccct
gcagcggctaaacctgcagccgctgcaccggccgctcctgctgctgcccccgtctcactg
ggcaccaagctggccggctttatcaagggcctgtttggtgatacgcccaagccggaacct
gaaccgacaccgctgcccgagattcgtcagggtcgcgcgccgagtcagaaccgcgaagag
cgtaatcgcccggctcaggaacgcagcaacagcaacaagcccaagcgccgtcgcgacagc
cgtgacaatgaccgtcgtcgtcgctcgcagcaggactccgacgaaatcatcaccatcacg
ccgcagcaggccgacagcgcaccggcaccgagttcttctgctgaagaacagagtggttcg
agcaagccgcgtcgtcgtcgcagccgcagccgcaagaatgacagtgatgagtcccgcaac
gaacgctctgcccgcagcgctgagacaagcgaagagcagcagctcgagcagaatgacacc
cgcgtaaaacagccggatgtcgtgagcccgagtgagactgatgacacgcctaaggcaaag
cctgcagcagagaagcgcgaagcacgcgacaacagcgccgaggacagcgaaacccgcggt
cgtcgccgtggtcgtcgtcgtcgcggttctgaccgcgttgccgagcgcacagggacagac
gctgatgcgactgcaacagttgccgcaacggcggtagccgccgagaccatgcagcagaac
gcaagcgagtcaaccgccgacaaggttactgccaccgccgtacaggatgccccagctatt
gcagagtctaccgagacgcaaacggctgcgagcgatgaagccaatcagaatgccactgtc
gcctccggcgacacgcagaatgatgcgactgcaccgcaggcagaggctgaagctagcacg
actgaagcgcctgctcctgcagaaagcgcagagaccgctgctgaagaggcccctgttgct
gaaactgcagcgcaatctgcggctcaagctgaagaacctgtccaggaagacgcagcagaa
gcccaaaaggcaagcactgaagcaacaactgaagctcctgaagtagtgactgaagccgca
acagacgctgccgaagagactgcgacagacactgtcgaggttgaaacggtgagtgctgaa
gtgctcgccgagcccgctgcaaccgaagaagctgcacagcaagctgaagccgagcaggca
acagcggtaacgcctgcgcagtccgacagcgcggtagaagcctctgcagacacagcagca
gaggctgcagaagtgacagccagcccggataccaccgaagctgaaaaagctgccgaagct
gaaaaagctgcaccggtcgaagccgctgaagccgctgaagctgaaacagccgaaacagtt
accgacgtggtcgctgaagccgcacctgcagccgaaaccactgcagtagaagtagaagcc
gccgctgaaaccacagaagttcaggccccggaagaagcgactgaagagccgactgaagca
gccgtagccgagcccgctatcgacacagccgtagccccggctgcacagcagcctgcaccg
cgtcgccgtcgtcgctcaggccgcgcgcctaatgacccgcgggaaaagcgccgcagtcag
cagaaagcgcaggatgaaaacgtggaaaaccagcactcctga
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