Marinobacterium aestuarii: A8C75_12775
Help
Entry
A8C75_12775 CDS
T04398
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mars
Marinobacterium aestuarii
Brite
KEGG Orthology (KO) [BR:
mars00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mars03016
]
A8C75_12775
Enzymes [BR:
mars01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
A8C75_12775
Transfer RNA biogenesis [BR:
mars03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
A8C75_12775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
SAM_Ribosomal_mS41
DUF6820
Motif
Other DBs
NCBI-ProteinID:
ANG63258
UniProt:
A0A1A9F042
LinkDB
All DBs
Position
2921609..2922136
Genome browser
AA seq
175 aa
AA seq
DB search
MRLFVAIDLPDPLQDAIARLQQPVRHLHWTAPERLHITLQFLGEQPGHRLETIYSALEDI
EFAPLDLRCEGVGQFSSGVIWLGVDQHPALEQLQQQIGTQLRAAGIALQQRRFIPHITLG
RCPGNRLDRVLEHVAARFYGQAFCFACDAFSLKSSLLRPTGALHHIEAEFLCTNA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttttcgtggccatcgacctgcccgacccgctgcaggacgccatcgcccgcctg
cagcaaccggtacgtcacctgcactggactgcaccggagcggctgcatatcacactgcag
tttctgggcgagcaacccggccaccgtctggagaccatttacagcgctctggaggacatc
gagttcgcgccactggacctgcgctgcgagggtgtagggcagttttcatccggggtcatc
tggctgggcgtcgatcagcacccggccctggagcagttgcaacaacagataggtactcag
ctgcgcgccgccggcattgcgctgcagcaacgccgtttcattccccatatcaccctgggc
cgatgccccggcaatcgcctggaccgcgtgctggagcacgtcgccgcacgtttctacggc
caggcattctgctttgcgtgtgatgccttcagccttaaaagcagcctgctgcgccccacc
ggagcgctgcaccatatcgaggctgaatttctctgcaccaacgcctga
DBGET
integrated database retrieval system
