Entry |
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Name |
(GenBank) RNA polymerase-binding ATPase
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KO |
K03580 | ATP-dependent helicase HepA [EC:5.6.2.-] |
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Organism |
mars Marinobacterium aestuarii
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Brite |
KEGG Orthology (KO) [BR:mars00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mars03021]
A8C75_13410
Transcription machinery [BR:mars03021]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A8C75_13410
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(3062858..3065719)
|
AA seq |
953 aa
MSRPQFSPGQRWISNTESELGLGVVVEQTGRSVTLNFPAVEEQRTYAVTNAPLSRVEYPV
GDKVRTTSGIELQITERQELNGCLFYHGTDQHGESLTLAELELDSRVRFSKPQDRLFAGQ
VDKNNAFLLRVDTQEHLQRHRQSEAYGLLGGRVQLLPHQYFIASQVARRPVQRVLLADEV
GLGKTVEAGLIMHQLLFSGRAQRVLIVVPDSLVHQWLVEMLRRFNLRFSILDPLRCVALE
AAGEGNPFESAQLVLCSLSFLTGDDERHRAAMDAGWDLLVVDEAHHLGWSEEAASHSYNA
IESLAKATPGLLLLTATPEQLGQDGHFARLRLLDPDRYHDLQAFRDEESEYRTISNLVQR
LQAEDVRDQLRDAPELLASLEHYLGETALAPLRAELEDGDIVHLVADAIASLLDRHGTGR
VLFRNTREGVQGFPKRELYRYPLVQPEAYADVLVDTNLDAVLHPEAGFDDDWLDWDPRVE
WLCEWLREHRADKTLVICARKNTARALEKQLRLFEGVKAAVFHEGMSLLERDRAAAYFAD
EDDSAQVLICSEIGSEGRNFQFAHHLVLFDLPLNPDLLEQRIGRLDRIGQRNDVQIHVPY
FEQSPQAVLLNWFDLGINAFKRNNPAGQALFQQFAPALRELLLCYDDAQLQQLLDDTRHR
ADELLEQLQAGRDRLLELNSCQPEPAARMIEHVAEASRSLELASYMERVFDLFGVEQQTH
GPDSMVLHPGNHMPVSSLPGLPEDGITATFQRTLALSREDMQFLTWEHPLVSGSMELVSE
GEFGNTALCSLKLPPLPPGTLLLEAFFTLRCTAPRALQMQRYLGQHSVRLVFDNNGNNLS
GIIAHGHINKLAERVGRRTAQSLVSHARPQIAEMVERAETLAATQDEQVREQARARADEL
LGAEIVRMRALAQVNPNIRDEEIALLEQQLEQVRAQIDLVHLELDALRIAVVE |
NT seq |
2862 nt +upstreamnt +downstreamnt
ttgtcaaggccgcagttttcccccggtcagcgctggatcagcaacacggagtcggagctt
gggctcggtgttgttgtcgagcagacggggcgtagcgtcaccctcaatttcccggcagtc
gaagaacagcgtacctatgcggtgaccaatgcgccgctgagccgtgtcgaatacccggtg
ggcgacaaggttcgtaccacctccggcatcgagctgcagatcaccgaacgccaggagctg
aatggctgtcttttttaccacggtaccgatcagcacggcgaaagcctgacgctggccgag
cttgagctcgacagccgcgtacgtttcagcaaaccccaggatcgtctgttcgcgggtcag
gtcgacaaaaacaacgccttcctgctgcgcgtcgatacccaggaacatctgcagcgccat
cgtcagtccgaggcctatggtctgctcggcgggcgcgtacagctgctgccgcaccagtat
tttattgccagccaggtcgcgcgccgcccggtgcagcgcgtgttgctggccgatgaggtc
gggcttggcaaaaccgtggaagccggtctgatcatgcatcagctgctgttcagtggccgt
gcccagcgcgtgctgatagtggtacccgatagtctggtacatcagtggctggtggaaatg
ctgcgtcgcttcaacctgcgtttcagcattctggatccgctgcgctgtgtggcgctggaa
gcggccggcgagggcaacccgttcgaaagcgcccagctggtgctctgcagtctgtctttc
ctgaccggcgatgacgagcgtcaccgtgctgccatggacgcgggctgggatctgctggtg
gtcgatgaggcccatcatctgggctggagcgaggaagccgccagccacagctataacgcc
atcgaatccctggccaaggcgacgcccgggctcttgctgctgactgccaccccggaacag
ctgggtcaggacggccactttgcgcgtctgcgtctgctggatcctgatcgctaccacgac
ctgcaggcgttccgtgacgaagagtccgagtaccgcaccatcagtaacctggtgcagcgc
ctgcaggctgaagacgtgcgtgaccagctgcgtgatgcacctgagctgctggcctcgctg
gaacactatctgggcgaaacggcactggcgccgctgcgcgcagagctggaagacggcgat
atcgtgcatctggtcgccgatgccatcgccagtctgctggatcgccacggcaccggtcga
gtactgtttcgcaatacccgcgagggcgtccagggtttccccaagcgcgagctctaccgc
tatccgctggtgcagccggaggcctatgccgacgtgcttgtggacaccaatcttgatgcc
gtattgcatcccgaagccggctttgacgacgactggctcgactgggatccgcgtgtcgag
tggctctgtgagtggctgcgcgagcaccgtgcagacaagacgctggtgatctgtgcgcgc
aagaacacggcccgggcgctggaaaaacagctgcgcctgttcgagggtgtcaaggcggcg
gtcttccacgaaggcatgagcctgctggagcgtgaccgcgccgccgcgtactttgccgat
gaggacgacagtgcccaggtgctgatctgttccgaaattggcagtgaagggcgcaacttc
cagtttgcccatcacctggtgctgtttgatctgccgcttaaccctgatttgctggagcag
cgcatcggccgtctggaccgtatcggtcagcgcaatgatgtgcagattcacgtgccctat
ttcgagcagagcccgcaggcggtactgctgaactggtttgacctgggcatcaatgcgttc
aagcgcaacaatccggctggccaggcgctgttccagcagttcgccccggccctgcgcgag
ctgctgctgtgctacgacgacgcgcagctgcagcagttgctggacgacacgcgccaccgc
gccgacgagttgctggagcagctgcaggccggacgcgaccgtctgctggaactcaattcc
tgccagcccgagcccgccgcacgcatgatcgaacatgtggccgaggcctctcgttcactg
gaactggccagctacatggaacgggtgttcgacctgttcggcgtcgaacagcagacccat
ggccccgatagcatggtgctgcacccgggcaatcacatgccggtgtcgagtctgccgggt
ctgccggaggatggcattaccgccaccttccagcgcactctggcgctgtcccgcgaggac
atgcagttccttacctgggagcatccgctggtgagtggctccatggagctggtcagtgag
ggcgaatttggcaacaccgcgctatgcagcctcaagctgccaccgctgccgccgggtact
ctgttgctcgaagcttttttcaccctgcgttgcacagcgccgcgcgcgctgcagatgcag
cgttacctggggcagcattcggtacgcctggtgttcgataacaacggcaataacctcagt
ggcatcatcgcccacggccatatcaacaagctggccgagcgcgtcgggcgccgcacggcc
cagtcgctggtgagtcatgccaggccgcagattgccgagatggtggagcgggccgaaacc
ctggccgctacccaggatgagcaggtgcgtgaacaggctcgcgcccgggctgacgaattg
ctgggtgccgagattgtccgcatgcgcgcactggcccaggtaaacccgaacattcgtgat
gaggaaatcgccttgctggagcagcagctggagcaggttcgggcacagattgatctggtt
catcttgagcttgatgccctgcgcatcgcggtggttgagtga |