Maribacter hydrothermalis: BTR34_00210
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Entry
BTR34_00210 CDS
T04597
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mart
Maribacter hydrothermalis
Pathway
mart03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mart00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTR34_00210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mart03019
]
BTR34_00210
03009 Ribosome biogenesis [BR:
mart03009
]
BTR34_00210
Enzymes [BR:
mart01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTR34_00210
Messenger RNA biogenesis [BR:
mart03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTR34_00210
Ribosome biogenesis [BR:
mart03009
]
Prokaryotic type
rRNA helicases
BTR34_00210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
APQ15857
UniProt:
A0A1B7Z7S9
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All DBs
Position
38377..40197
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AA seq
606 aa
AA seq
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MTKFEALGLQKSLLDAITDMGFETPSEVQEKAIPILLESETDLVALAQTGTGKTAAFGFP
LIQKIDRDSRTTQGLILSPTRELCLQITNEMQAYSKYERNINVVAIYGGASITEQARQIK
RGAQIIVATPGRMKDMISRRLVDISKIDYCVLDEADEMLNMGFMEDIKEILSNTPKEKST
WLFSATMPKEVAVIAKKFMHSPQEITVGAKNSGASTVQHEYYVVGGRDRYPALKRLADTN
PDIFSVIFCRTKRDTQKVAEKLIEDGYNAGALHGDLSQNQRDLVMNSFRKKQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIITRSEQRKIKAIENK
INQKFLAKQIPSGMEICEIQLYHLANKIKDTKINKDVDSYLPAINEVFEGIDREDLIKKI
VSVEFTRFFNYYNKTKDLNSTDNGRDRGEGRDRAEIPTSGAVRYFINVGEKDGYDWMSLK
DFIRDTVGLGQEDVFKVDVKESFSFFNTEAEATQQILDKFTEFKVDGRFVNVEVSKNPGG
GGGSRRRSGGGGGFKGKRSGRRDDDRGGRGRKDSDRESKGRRRDRSESSSPNSGKRRSTK
RKGDFF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtttgaagcactaggactgcaaaagtccttattagatgctattactgatatg
ggttttgaaaccccatcagaagtacaagaaaaagcaatcccaattttattggaaagtgaa
accgatttggttgccttagcgcaaacaggtacaggtaaaactgccgcattcggctttcct
ttaattcaaaaaattgatagagatagtagaaccacacaaggtttaattctatcaccaact
cgtgagctttgtttgcaaatcaccaatgaaatgcaagcatactctaagtatgaacgtaat
attaacgtagttgctatttacggtggcgccagtattacggaacaagcaagacaaataaaa
agaggtgctcaaataatagtagctaccccaggtagaatgaaagatatgatcagcagacgt
cttgttgatatttctaaaatagactattgtgttcttgacgaagcagatgaaatgctgaac
atgggctttatggaagatattaaagagattctttccaatacgcctaaagaaaaatctact
tggttattttctgctaccatgcctaaagaggtagcagttattgctaaaaaattcatgcat
tctccacaagagattacagtgggtgccaaaaactctggtgcatcaactgtacaacatgaa
tattatgttgttggcggtagagaccgctaccctgctttaaaaagattagcagataccaac
ccagatattttttccgttattttctgtagaacaaaacgtgatacgcaaaaagttgccgaa
aaactaatcgaagacggttataatgctggtgctttacacggagatttaagccagaaccaa
agagatttggtaatgaactctttccgtaagaaacaaatacaaatgttagtggcaactgat
gtagctgcacgtggtattgatgtggatgacattacacatgttatcaattaccaattacca
gatgaaatagaaacgtacacacaccgaagtggtagaactggtagagcgggtaaatctggt
atctccatggttattattacccgtagtgaacaacgcaagataaaggcaattgaaaataaa
atcaatcaaaagtttttagctaaacaaattccttcaggaatggaaatttgtgagattcaa
ttgtatcatttagccaataaaataaaggacacaaaaataaataaagatgttgatagctac
ttaccggctattaacgaggttttcgaaggtattgatcgcgaggatttaataaaaaaaatt
gtttcagttgaatttacaagattcttcaactattacaataaaaccaaagaccttaactct
accgataatggtagagatagaggcgaaggtagagatagagcagaaataccaactagtggt
gccgttcgctatttcataaacgtcggtgaaaaagacggatatgattggatgtcattaaaa
gatttcattagggataccgttggccttggtcaagaagacgtatttaaagtagatgtgaaa
gaaagtttttcgttctttaataccgaagcagaagctacacaacaaatacttgataaattc
accgaatttaaagttgatggtagattcgtaaatgttgaagtttccaaaaaccctggtggc
ggtggcggtagccgacgcagaagcggaggcggtggcggtttcaaaggaaaaagaagcggc
agaagagatgatgaccgtggtggaagaggaagaaaagatagtgatcgcgaatctaaagga
agaagacgtgatcgtagtgaatctagcagtccaaactctggaaaaagacgaagcactaaa
agaaagggagatttcttttag
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