Maribacter hydrothermalis: BTR34_03295
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Entry
BTR34_03295 CDS
T04597
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mart
Maribacter hydrothermalis
Pathway
mart03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mart00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTR34_03295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mart03021
]
BTR34_03295
03400 DNA repair and recombination proteins [BR:
mart03400
]
BTR34_03295
Enzymes [BR:
mart01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTR34_03295
Transcription machinery [BR:
mart03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTR34_03295
DNA repair and recombination proteins [BR:
mart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTR34_03295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
APQ16421
UniProt:
A0A1B7ZB96
LinkDB
All DBs
Position
complement(762424..766722)
Genome browser
AA seq
1432 aa
AA seq
DB search
MARIKDNNPVKRFDKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQAGIAKGPEGEEIQKMDFLTEEEYLNILETIPQENQY
LEDSDPNKFIAKMGAECLIDLLGRINLKELSFELRHKANTETSKQRKTEALKRLQVVEAL
RESQENRENEPEWMIMKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLV
EIKAPEVILRNEKRMLQEAVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPEMKLFECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVMLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLVCTAFNADFDG
DQMAVHLPLGPEAILECQLLMLASHNILNPANGSPITVPSQDMVLGLYYMTKERKSTPEL
IVKGEGITFYSYEEVEIAFNEGMVDLNAGIKVRAKDFNEEGELVYKIIPTTVGRVLFNME
VPEAAGYINDVLNKKSLRDIIGGILSVTDVPTTADFLDKIKTMGYDFAFRGGLSFSLGDI
IIPQEKHEMIAEANVQVDGIKANYNMGLITNNERYNQVIDVWTSTNAQLTELAMKRIRED
QQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIINTEDCETLRGVEVEALKKNE
EVVESLGERILGRVSLHDVYNPMTEELILKSGQQIMEADVKKIEASPIEKVEVRSALTCE
ADKGICAKCYGRNLSTNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDNK
LEVKFSGIAEIEDLRTITGEGADGKPAEIVISRTSEIKVVDAKTGITLSTGNIPYGSQLY
VKNGAKVEKGDVICSWDPYNGVIVSEFPGKIAYENIEQGITYQVEIDEQTGFQEKVISES
RNKKLIPTLLIQDAKGETLRSYNLPVGSHIMVDDGDKIKEGKILVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGEVKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILSIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVRIVDPGDTIFLENQLIHKDDFIKENDDIFGKKVVMDAGDSSNLKPGQIVTPREL
RDENSLLRRGDKALVDARDAVSATATPILQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKIDTLEGLKENVIVGHKIPAGTGMRDYDSIIVGSKEEYDEIMARKEALRF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaataaaagataataacccagtaaaaaggttcgataaaatttcaataggatta
gcttcgccagaatcaattttggcagagtcaagaggtgaagttttaaaacctgaaacaata
aattatagaactcacaaaccagaacgtgatggtttgttctgtgagcgtatttttggtcct
gttaaggattacgaatgtgcctgtggaaaatataaacgtattcgttaccgaggtatcgtt
tgtgatcgttgtggtgtagaggttactgagaaaaaagtaagaagagaccgcgtagggcac
attaatttggttgtgccggtagctcatatttggtatttccgttcgttacctaataaaata
ggttatcttttaggtttaccgtctaagaaattagatatgattatttactacgaacgttat
gtagtaatacaagcaggtatagctaaaggtcctgaaggtgaggaaattcaaaaaatggat
ttcttaactgaagaggagtacttaaatattttagaaactattccccaagaaaatcagtat
ttagaagattctgacccaaataagttcatagctaaaatgggtgctgaatgtttaattgat
ttattgggtagaatcaatctaaaggaactttcttttgagcttagacataaagcaaataca
gaaacttcaaagcaaagaaaaactgaagcattaaaaagacttcaggttgttgaagcgctt
cgtgaatctcaagagaatagggagaacgagccagaatggatgataatgaaagtaattccg
gttataccaccagaattacgtccattagtgcctttagatggtggtcgttttgcaacatca
gatttaaatgatctttacagaagggtaattattagaaataaccgtttaaagagattagta
gaaataaaagctccagaagtaattttacgtaatgaaaaacgtatgcttcaagaagctgta
gattctttatttgataatacaagaaaagcttctgctgttaagacagaatctaacagacca
ctaaaatctctttcagattcgcttaaaggtaagcaaggtcgtttccgtcaaaatttatta
ggtaaacgtgttgattattctgcgcgttctgtaattgttgtgggtcctgaaatgaagttg
ttcgaatgtggacttccaaaagatatggcagcggaattatacaagccttttgtaatcaga
aaactgattgaaagaggaattgttaagaccgtaaaatcagccaagaaaataatagataag
aaagagcctgtagtttgggatattttagagaatgtattgaaaggacatccggtaatgttg
aacagagctcctacattacaccgtttaggaattcaagcgttccagcctaaactaattgaa
ggtaaagcaatacgtttacatcccttagtatgtactgcatttaatgcggatttcgatggt
gaccaaatggcggttcaccttccattaggacctgaagctattttagagtgtcagttatta
atgttggcctcgcataatattttgaaccctgctaatggttcaccgattactgtgccttct
caggatatggttttgggtctatattatatgaccaaggaaagaaaatcgactccggaactt
atagttaaaggagaaggaattacattttattcatatgaagaggtagagatagctttcaat
gaaggaatggttgatttgaacgctggaattaaagtaagagcaaaggattttaatgaagaa
ggagagttagtatacaagataattcctactacagttggaagagtattgtttaacatggag
gtgccagaagctgctggttacataaatgatgtattgaacaaaaaatctcttcgagatatt
attggaggtattttaagtgtaaccgatgtgccaacaacagctgatttcttagacaaaatt
aaaacaatggggtatgatttcgcatttagaggcggactatcctttagtttaggagatatt
attattccacaagagaagcatgaaatgattgctgaagctaacgtacaagttgatggaatt
aaggccaactataacatgggtctaattactaacaatgagcgttataatcaagtaattgat
gtttggacttctacaaacgcgcaattgactgaattggcaatgaagcgtatacgtgaggat
caacaaggattcaactcggtgtatatgatgcttgattctggtgcaaggggttctaaagag
caaattcgccagttaacaggtatgcgtggtttaatggctaagccgaagaaatctactgca
ggtggtggtgagattattgaaaacccgattctttctaactttaaggaaggtttatccatt
ttggagtactttatttcaactcacggtgctcgtaaaggacttgcagatacggctttgaaa
acggcagatgcagggtacttgactagaagattggttgatgtttctcaagatgtaattatt
aacacagaagattgtgaaacacttagaggtgttgaagtagaggcacttaagaagaatgaa
gaggttgttgaaagtcttggtgaaagaattttaggcagggtatcattacatgatgtgtac
aacccaatgacagaggaattaattcttaagtcaggtcaacaaattatggaagccgatgtt
aagaaaattgaagcttctcctatagaaaaggttgaagtgcgttcagctcttacatgtgag
gcagataaaggaatttgtgctaaatgttatggtagaaatctttcaaccaataaaatggtt
caaagaggtgaagccgtaggtgttgttgcagcacaatctattggtgagccaggtactcag
ttgacattgagaactttccacgtaggtggtattgcaggtaacatatctgaagataataaa
ttagaagttaagttttcaggaattgctgaaatagaagatttaagaacaattacaggtgag
ggtgcagatggtaaacctgccgaaatagttatttccagaactagtgaaattaaagttgtc
gatgctaaaacaggtataacgttaagcacaggtaacattccttatggttctcaattatat
gtgaagaatggtgctaaagtagaaaaaggagatgtaatttgttcttgggacccatataac
ggtgtaattgtttctgaatttccagggaaaattgcttatgagaatattgaacagggaata
acttatcaagttgaaattgatgaacaaacaggtttccaagaaaaagtaatctctgaatct
agaaacaaaaagttaattcctactttattgattcaagatgctaagggtgaaacattacgt
tcttataacttaccggtagggtcacatattatggttgatgatggcgataagatcaaagaa
ggtaaaatcttggtgaaaataccacgtaagtccgctaaggctggtgatattacaggaggt
ctacctagagtaactgaattgtttgaagcaagaaatccttctaatccagcagtggtatct
gaaattgatggtgttgtttcttttggtaaaattaagagaggaaatagggaaatcatcatt
gaatctaaattaggtgaggtgaagaaatacttggttaaactttctaaccaaattttagtt
caggaaaatgattatgttagagcaggaatgccattgtctgacgggtcaattacacctgaa
gatatattatctatcaaaggaccatctgcagtacaacaatatttagtaaatgaagtgcag
gaggtatacaggctacaaggggttaagattaatgataagcactttgaagttgtagttaga
cagatgatgagaaaggttagaatagtagatccaggagatactattttccttgaaaatcaa
ttgattcacaaggacgatttcatcaaagaaaatgatgatatttttggaaaaaaagtagtt
atggacgccggtgattctagtaatcttaaaccaggtcaaatagttactcctcgtgaatta
agagatgaaaattctttattaagacgtggggataaagctttagtagatgcgcgtgatgca
gtttccgcaacagcaacccctatattacaggggattacaagagcatctttacagacgaaa
tcatttatttctgctgcatcgttccaagagacgactaaagtattgaacgaagccgctgta
agtggtaaaattgataccttagaaggccttaaagagaatgtaattgttggtcataagatt
ccggcaggtacaggtatgagagactacgatagtattattgttggatccaaagaagaatat
gatgagataatggccagaaaagaggccttaagattctaa
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