KEGG   Maribacter hydrothermalis: BTR34_12655
Entry
BTR34_12655       CDS       T04597                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mart  Maribacter hydrothermalis
Pathway
mart03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mart00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BTR34_12655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mart03021]
    BTR34_12655
   03019 Messenger RNA biogenesis [BR:mart03019]
    BTR34_12655
Transcription machinery [BR:mart03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BTR34_12655
Messenger RNA biogenesis [BR:mart03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BTR34_12655
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_22
Other DBs
NCBI-ProteinID: APQ18123
UniProt: A0A1B7Z178
LinkDB
Position
complement(2964896..2966527)
AA seq 543 aa
MFEISDLKSKKLPELQEIAKGLKVPKFKTLKKLDLVYQILDLQAANPKVAAAIAPTITEE
SNKPTEEKPKPKPRPRQRVAPKAANAPKEGSKQETVKKENILEKDSKETADTTKPRPRPR
PKPANQPNNKKEFQKNSPQNNNQNKKPNPRTPHDKSNFDKDLKNRYKEPEYEFDSIIASE
GVLDIMQDGYGFLRSSDYNYLSSPDDIYVSQSQIRLFGLKTGDTVLGNVRPPKEGEKYFP
LIKVNKINGIDPQIVRDRVSFEHLTPLFPQEKFNLAERQSTISTRIIDLFSPIGKGQRGM
IVSQPKSGKTMLLKDIANGIAANHPEVYQIILLIDERPEEVTDMQRNVRGEVVASTFDKE
PTEHVRVANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALH
KPKRFFGAARNIEGGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRKIANRRIF
PAIDLTSSSTRRDDMLLDENTLQRMWIMRKYLADMNPVEAMEFIEQRFKQTKNNEEFLMT
MNQ
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgtttgagatttcagatttaaaatcaaaaaagctacctgagcttcaggaaattgctaaa
ggtctaaaggttcctaaatttaaaaccttaaaaaaattagacttagtctaccaaatatta
gacttacaagctgccaatcctaaagtagctgcggccattgcccctacaattacagaagaa
agcaacaagccaaccgaggaaaaaccaaagccaaaaccaaggcctagacagcgtgttgca
ccaaaagcagctaatgcaccaaaagagggcagtaaacaagagactgtaaaaaaggaaaat
atccttgaaaaagattctaaggaaactgcagataccacaaaacctagaccacgacctagg
ccaaaacctgcaaatcagcctaataataaaaaggagttccaaaagaattctcctcaaaat
aataatcaaaacaaaaaacctaaccctaggactcctcatgataaaagcaattttgacaag
gatttaaaaaacagatataaggagcctgagtatgagttcgattccattattgccagtgaa
ggggtattagatatcatgcaagatggttacggatttttgcgctcatcagattacaattac
ttatcatcgcctgatgatatttatgtatcgcaatcgcaaattcgtctttttgggttaaaa
actggggatacggtattaggaaatgtaagacctccaaaagaaggagaaaagtatttccct
ctaataaaggtgaacaaaattaacggtatagacccacagatagttcgtgatcgtgtatct
tttgagcatttgactccgttattcccacaagaaaaattcaatttggcagaacgtcaaagc
acaatatctactcgtattatcgatttgttctccccaataggaaaaggacaaagaggtatg
atcgtatcacaacctaagtctggtaaaaccatgcttttaaaagatatagccaacggtatt
gcagcaaatcatccagaagtttatcaaataatattattaattgatgaacgaccagaagaa
gttaccgatatgcaacgtaatgtgcgtggtgaagtagttgcttcaacttttgataaagaa
ccaacagaacatgtacgcgtagcaaatattgttttagaaaaagcaaaacgattggttgaa
tgtgggcatgatgtagtgatccttttggattccattacacgtttggcaagagcctacaat
acggttcaaccagcatctggtaaagtattaagtggtggtgttgatgctaatgccttgcac
aagccaaaaagattctttggggcagctcgtaacattgaaggtggaggttctttatccatt
attgctacagcattgacagaaactggttctaaaatggacgaggttatctttgaagaattt
aaaggtaccggtaacatggagcttcaattagatcgtaagattgcgaacagaagaattttc
cctgcaattgaccttacatcttccagtactcgtagagatgacatgctacttgatgaaaat
accttgcaacgtatgtggattatgcgcaaatatcttgcagatatgaaccctgtagaagca
atggaatttattgagcaacgttttaagcaaactaagaataatgaagaattcttgatgact
atgaatcaatag

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