Maribacter hydrothermalis: BTR34_12655
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Entry
BTR34_12655 CDS
T04597
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mart
Maribacter hydrothermalis
Pathway
mart03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mart00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTR34_12655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mart03021
]
BTR34_12655
03019 Messenger RNA biogenesis [BR:
mart03019
]
BTR34_12655
Transcription machinery [BR:
mart03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BTR34_12655
Messenger RNA biogenesis [BR:
mart03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BTR34_12655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APQ18123
UniProt:
A0A1B7Z178
LinkDB
All DBs
Position
complement(2964896..2966527)
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AA seq
543 aa
AA seq
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MFEISDLKSKKLPELQEIAKGLKVPKFKTLKKLDLVYQILDLQAANPKVAAAIAPTITEE
SNKPTEEKPKPKPRPRQRVAPKAANAPKEGSKQETVKKENILEKDSKETADTTKPRPRPR
PKPANQPNNKKEFQKNSPQNNNQNKKPNPRTPHDKSNFDKDLKNRYKEPEYEFDSIIASE
GVLDIMQDGYGFLRSSDYNYLSSPDDIYVSQSQIRLFGLKTGDTVLGNVRPPKEGEKYFP
LIKVNKINGIDPQIVRDRVSFEHLTPLFPQEKFNLAERQSTISTRIIDLFSPIGKGQRGM
IVSQPKSGKTMLLKDIANGIAANHPEVYQIILLIDERPEEVTDMQRNVRGEVVASTFDKE
PTEHVRVANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALH
KPKRFFGAARNIEGGGSLSIIATALTETGSKMDEVIFEEFKGTGNMELQLDRKIANRRIF
PAIDLTSSSTRRDDMLLDENTLQRMWIMRKYLADMNPVEAMEFIEQRFKQTKNNEEFLMT
MNQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagatttcagatttaaaatcaaaaaagctacctgagcttcaggaaattgctaaa
ggtctaaaggttcctaaatttaaaaccttaaaaaaattagacttagtctaccaaatatta
gacttacaagctgccaatcctaaagtagctgcggccattgcccctacaattacagaagaa
agcaacaagccaaccgaggaaaaaccaaagccaaaaccaaggcctagacagcgtgttgca
ccaaaagcagctaatgcaccaaaagagggcagtaaacaagagactgtaaaaaaggaaaat
atccttgaaaaagattctaaggaaactgcagataccacaaaacctagaccacgacctagg
ccaaaacctgcaaatcagcctaataataaaaaggagttccaaaagaattctcctcaaaat
aataatcaaaacaaaaaacctaaccctaggactcctcatgataaaagcaattttgacaag
gatttaaaaaacagatataaggagcctgagtatgagttcgattccattattgccagtgaa
ggggtattagatatcatgcaagatggttacggatttttgcgctcatcagattacaattac
ttatcatcgcctgatgatatttatgtatcgcaatcgcaaattcgtctttttgggttaaaa
actggggatacggtattaggaaatgtaagacctccaaaagaaggagaaaagtatttccct
ctaataaaggtgaacaaaattaacggtatagacccacagatagttcgtgatcgtgtatct
tttgagcatttgactccgttattcccacaagaaaaattcaatttggcagaacgtcaaagc
acaatatctactcgtattatcgatttgttctccccaataggaaaaggacaaagaggtatg
atcgtatcacaacctaagtctggtaaaaccatgcttttaaaagatatagccaacggtatt
gcagcaaatcatccagaagtttatcaaataatattattaattgatgaacgaccagaagaa
gttaccgatatgcaacgtaatgtgcgtggtgaagtagttgcttcaacttttgataaagaa
ccaacagaacatgtacgcgtagcaaatattgttttagaaaaagcaaaacgattggttgaa
tgtgggcatgatgtagtgatccttttggattccattacacgtttggcaagagcctacaat
acggttcaaccagcatctggtaaagtattaagtggtggtgttgatgctaatgccttgcac
aagccaaaaagattctttggggcagctcgtaacattgaaggtggaggttctttatccatt
attgctacagcattgacagaaactggttctaaaatggacgaggttatctttgaagaattt
aaaggtaccggtaacatggagcttcaattagatcgtaagattgcgaacagaagaattttc
cctgcaattgaccttacatcttccagtactcgtagagatgacatgctacttgatgaaaat
accttgcaacgtatgtggattatgcgcaaatatcttgcagatatgaaccctgtagaagca
atggaatttattgagcaacgttttaagcaaactaagaataatgaagaattcttgatgact
atgaatcaatag
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