Palleronia sp. THAF1: FIU81_01640
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Entry
FIU81_01640 CDS
T06247
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maru03009
]
FIU81_01640 (rimO)
Enzymes [BR:
maru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FIU81_01640 (rimO)
Ribosome biogenesis [BR:
maru03009
]
Prokaryotic type
ribosomal protein modification factors
FIU81_01640 (rimO)
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QFU07369
UniProt:
A0A5P9J6R2
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All DBs
Position
complement(308687..310099)
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AA seq
470 aa
AA seq
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MAQNPPSLRPDLANARVPRDANARLQRDLDTTGPARRGAGPTIGMVSLGCPKALVDSERI
LTRLRAEGYGISPDYTGADAVIVNTCGFLDSAKAESLDAIGEALRENGRVIVTGCLGAEA
DYITGAHPKVLAVTGPHQYEQVLDAVHAAVPPDPDPFVDLLPASGVSLTPRHYSYLKISE
GCNHKCKFCIIPDMRGRLQSRPQKAVLREAEKLVESGVRELLVISQDTSAYGTDWAERPE
KAPILGLSRELGQLGAWVRLHYVYPYPHVRELVPLMADPANGLLPYLDIPFQHAHPEVLK
RMARPAAAARTLDEIAAWRASCPDLVLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRIGC
FQYENVDGARSNALPDHVPDEVKQDRWERFMEKAQAISEAKLEAKVGTRMEVIVDLVEDD
AATCRTKGDAPEIDGHLYIDEGHEDLSPGDIVTVEVDEAGEYDLWGSIRH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaccctccttcattgcgtcccgacctcgccaatgcgcgcgttccgcgcgac
gccaacgcccggttgcagcgcgacctagacaccaccggccccgcgcggcgtggcgccggg
ccaaccatcggcatggtgtcccttggctgcccaaaggcgctggtcgacagcgagcgcatc
ctgacgcggctgcgggcagaaggctacggcatctcgcccgattacaccggtgcggatgct
gtgatcgtgaacacctgcgggttccttgatagcgccaaggcagagagcctggacgccatc
ggcgaggccctgcgcgagaacggtcgcgtcatcgtcaccggctgtctgggcgcagaggcc
gactacatcaccggcgcacatccgaaggttctggcggtcaccgggccacatcaatacgag
caagtgttggacgccgtccacgccgccgtgccgccagacccagatcctttcgtcgacctg
ctgccggcatcgggcgtgtcgctgacgccgcgccactacagctacctcaagatctccgag
ggctgtaaccataagtgcaagttctgcatcattcccgacatgcgcgggcgtctgcaatcg
cgtccccagaaggcggtgttgcgcgaggcggaaaagctggtcgagtccggggtgcgcgag
ttgctggtgatcagccaagacaccagcgcctatgggaccgactgggcagagcggcccgag
aaagcgccgatccttggcctgtctcgcgagttgggccagcttggggcatgggtccggctg
cactacgtctacccctacccccacgtgcgcgaactggtgccgctgatggccgatccggcg
aacggattgctgccttacctggacattccgttccaacatgctcaccccgaggtgctgaag
cgcatggcccgccccgccgccgccgcccgcacgctggacgagatcgccgcgtggcgcgcg
tcctgtcccgatctggtgctgcgctcgaccttcatcgtcggctatcccggcgagaccgag
gccgaattccagaccctgcttgactggctggacgaggcgcagctggatcgcatcggctgc
ttccaatatgaaaacgtggacggcgcgcggtcgaacgccctgcccgaccatgtgcccgac
gaggttaagcaggatcgttgggagcggttcatggagaaggcccaagcgatttccgaggcg
aagctggaggccaaagtcggcacccggatggaagtgatcgtggatcttgtggaagacgac
gccgccacctgccgcaccaagggcgacgcgccggagatcgacgggcatctgtatatcgac
gaggggcacgaggatttgtcgccgggggatatcgttaccgtcgaagtggacgaggcgggc
gagtatgatctttgggggtcgatccgacactag
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