Palleronia sp. THAF1: FIU81_02125
Help
Entry
FIU81_02125 CDS
T06247
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FIU81_02125 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_02125 (xseA)
Enzymes [BR:
maru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FIU81_02125 (xseA)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FIU81_02125 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Apolipoprotein
Dak2
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QFU07466
LinkDB
All DBs
Position
402222..403757
Genome browser
AA seq
511 aa
AA seq
DB search
MELFDETGPGANAHEYTVSEISGAVKRTLEGEFGRVKVRGEIGRVFIARSGHLYFDVKDD
RNVLACVTWKGQAAGLTQQPEEGMEVIATGKLTTFGSQSKYQLTVDDIRPAGVGALMAML
EKRKAALEAEGLFAPERKRPLPFLPEVIGVVTSPSGAVIRDILHRLRERFPRKVLVWPVA
VQGRECAPQVARAIEGFNALSPGGSIPRPDLLIVARGGGSIEDLWGFNEEVVARAAAASA
IPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRLELATWLDGQGARLSRGLEQAV
GSRRQRLADLSRALPRPETLTAPARQKFDWVEARLPLALTAGVDRRRADLAATAAGLRPS
VLRDRIATRRDRVDGFADRLAPALERGVRDRRERLARISVSDSTIRRNLAQGATDLANYS
DRMERALTSSIDAARKRLDATARLHATLGYQATLERGFAVVRDGDSVVTTKAQAKSAARL
EIEFRDGKFPLTGPAPKKPKPESPPEQGSLL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggaacttttcgacgaaaccggacccggcgcgaacgcccacgaatacactgtctccgag
atttcgggtgcggtgaaacgcacgctggaaggcgaattcggacgcgtcaaggtgcgcgga
gagatcgggcgcgtcttcattgcccgctctggccacctatatttcgacgtcaaggacgac
cgcaacgtgctcgcctgcgtgacgtggaagggccaggccgccggcctgacccagcagccg
gaagaggggatggaggtcatcgccaccggcaagctgacgaccttcggctcgcagtcgaaa
taccagctgacggtggacgatatccgcccagccggcgttggcgcgctgatggcgatgctg
gaaaagcgcaaggcggcgctggaagccgaagggctgttcgcgcccgaacgcaagcgcccg
ctgcccttcctgccagaggtgatcggcgtcgtcacctcgccctccggtgcggtcatccgt
gacatcctgcaccgcctgcgcgaacgcttcccgcgcaaggtgctggtctggcccgttgcc
gtgcagggccgcgaatgcgcgccgcaggttgcgcgcgccatcgaaggcttcaacgcgctg
tctcccggtggatcgatcccgcggcctgacctgctgatcgtcgcgcgcggtggcggctcg
atagaggatctgtggggcttcaacgaagaggtggtcgcgcgcgccgcggcagccagtgcg
atcccgttgatctctgccgtcgggcacgagacggacacaacgcttatcgactacgtgtcc
gacaagcgcgcgccaacgcccaccgccgccgccgaattggcggtgcccgtgcgcttggaa
ttggcgacgtggcttgatgggcagggcgcgcgactgtcgcgcggattggagcaggctgtg
gggtcgcgccgtcagcggttggcggacctgtcacgtgccttgccgcgtcccgaaactctg
accgcacccgcgcgccagaagttcgactgggtcgaggcgcgcttgccgctggccctgacg
gctggtgtggaccgtcgccgcgccgatctggccgcaacggctgctggattgcgcccgtcc
gtgctgcgcgaccgtatcgcgacgcgccgggaccgggtcgatggcttcgcggatcgtctt
gcgcccgctttggaacgtggcgtgcgggaccggcgggaacgcttggcgcgcatttcggtg
tccgacagcacgatccggcgcaacttggcgcaaggcgcgaccgatcttgcgaattactct
gatcggatggaacgcgcccttaccagttcgatcgatgcagcgcgcaaaaggttggacgcg
accgcccggctgcatgcgacactgggctatcaggccacgctagagcggggcttcgcggtc
gtccgcgatggcgattccgtcgtcaccacgaaggcgcaggcaaaatctgcggcgcggctg
gagatcgagttccgggacgggaaatttcctttgaccggacctgcgccgaagaagccgaaa
ccggagtctccgccggaacagggttctttgctatag
DBGET
integrated database retrieval system
