Palleronia sp. THAF1: FIU81_03140
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Entry
FIU81_03140 CDS
T06247
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maru03009
]
FIU81_03140 (rluC)
Enzymes [BR:
maru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
FIU81_03140 (rluC)
Ribosome biogenesis [BR:
maru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIU81_03140 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QFU07665
LinkDB
All DBs
Position
616000..617043
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AA seq
347 aa
AA seq
DB search
MSGVHTRKIEAGEGDQRLDRWFRKHYPQVPQGRIEKMCRKGEIRVDGGRVKTATRVEEGQ
EVRIPPLPDTPAPAVHRSDAHVSDADAKMIRAAVIYRDDHIIAINKPPGLPTQGGSKQLR
HVDQMSEALRDGFDDKPKLVHRLDKDTSGVLLLARTREAAKGLTEALRHKATRKIYWAAV
AGVPQPKMGTIKYGLVKAAGHGASGEGEKMICLHPRDVADTPGAKRAETDFIVLSALGGR
LSWCALEPITGRTHQLRAHMSELGHPIIGDGKYGGSGQENLGDGWGAQLGGDLSKKLHLH
ARSMMFQHPVTHAQINLTAPLPDHMKRTWASLEWDVGDVPDDPFDPS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggttcacacgcgcaagatcgaggcgggcgagggcgatcaacgtctggatcgc
tggttccgcaagcactacccgcaggtgccgcagggtcgtatcgaaaagatgtgtcgcaag
ggcgagatccgcgtcgatggcggtcgcgtgaaaaccgcgacccgcgttgaagaggggcaa
gaggttcgtatcccgccgctgcccgacacacccgcgcccgccgtgcatcgcagcgacgcc
catgtcagcgacgccgacgccaagatgatccgcgccgccgtgatctaccgcgatgaccac
attatcgccatcaacaagccgccggggctgccgacgcagggcggatcgaagcagttgcgc
cacgtggatcagatgtccgaggcgctgcgcgacggcttcgacgacaagcccaagctggtg
caccggctggataaggatacctctggcgtcctgctgcttgcccgcacgcgggaagccgcg
aagggtctgaccgaagccctgcgccacaaggcgacgcgcaagatctactgggccgctgtc
gcgggcgtgccgcagccgaaaatgggcacgatcaagtatgggctggtgaaggccgccggt
catggggcgtccggcgagggcgagaagatgatctgcctgcatccacgcgacgtggccgac
acgcccggcgccaagcgggccgaaacagacttcatcgtactgtcggcccttggcggccgc
ctgtcttggtgcgcgttggagccgattacgggccgaacgcaccagctgcgtgcgcatatg
tcagagctgggccatccgatcatcggcgacggcaagtatggcgggtccgggcaagagaac
cttggcgatggctggggcgcgcagttgggcggcgacctgtcgaagaagctgcacctgcac
gcgcgttcgatgatgttccagcatccggtaacccacgcgcagatcaatctgactgcgccg
ctgccggatcatatgaagcgcacttgggcctcgctggaatgggacgtgggcgatgtgcct
gacgatccgttcgacccaagctga
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