Palleronia sp. THAF1: FIU81_03505
Help
Entry
FIU81_03505 CDS
T06247
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru03030
DNA replication
maru03430
Mismatch repair
maru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU81_03505 (dnaE2)
03430 Mismatch repair
FIU81_03505 (dnaE2)
03440 Homologous recombination
FIU81_03505 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maru03032
]
FIU81_03505 (dnaE2)
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_03505 (dnaE2)
Enzymes [BR:
maru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU81_03505 (dnaE2)
DNA replication proteins [BR:
maru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU81_03505 (dnaE2)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU81_03505 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
SSB
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QFU07736
UniProt:
A0A5P9J7Z0
LinkDB
All DBs
Position
690545..694066
Genome browser
AA seq
1173 aa
AA seq
DB search
MSDPRFIHLRLHSEYSLLEGAMRLKKLPALVAGMGMPAVALTDTDNMFAALEFSVGAAEA
GVQPIVGCQVSVGYGAVPGRGGVSMPAPLVLLAQSEAGYENLMKLNSQLYLEGDRSVPQV
SLEDLAAHGDGLICLSGGPEGPVGKLLQAGQRDKAEALLTRLAAIYPQRLYVELQRHPGD
GGALPEAERATERGHVEMAYAMDLPLVATNDVYFPKPDMYEAHDALICIADGAYVDQNEP
RRRLTPQHYLKSPSEMCALFADLPEATANTVEIARRCAFATYRRDPILPKFADDEVDELR
RQAIEGLKERLAVIPHAAPVEEYEKRLEFELGIIEGMGFPGYFLIVADFIKWAKEQDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QEKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIAQALR
DEPRLREEARNEEVVKRLLDYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYRDPKSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDLINQSRPIHIGPNGEELYAPADGAEN
QMNLIPLDDEKSYQLYARAKTVAVFQVESTGMMDALRRMKPTCIEDIVALVALYRPGPME
NIPKYCEVKNGLSERDKLHPTVDHILDETQGIIVYQEQVMQIAQEMAGYSLGGADLLRRA
MGKKIQAAMDAEKPKFLAGAKENGVDETTAMDTWALLDKFANYGFNKSHAAAYAVVSYQT
AWLKANHPVEFMAGVCNCDIHLTDKLAVYIEEARRGLSIEIVPPCVNRSIETFSVDQGRI
VYGLGALKNVGLDAMRLVVEGRTEGAQDGRDGKPFATLYDMARRVDLKRIGKRPLEMLAR
SGAFDQLDPNRRRVFDSLDALVGYSAAIHEQKSSNQVSLFGEAGDDLPEPRLSPVDDWLP
TERLAEEHTAIGFYLSGHPLDDYMGALKRQKVMTLEQVHERALAGPHVAKMAGVVASRQE
RKSARGNRFAFIGLSDPSGLYEVTIFSDTLEASREYLEPGTNVVVQVEATMESEQLKLLG
RSIAPIDSAVADAGTSGLMVYLDAPEAVGSIASVLDRAREDRQIRTRGPVKLCLMESGLP
GEVEVELGDDFPLTPKIKSALKSLGGVMTVEDL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccccgattcatccacctgcgtctgcattcagagtattccttgctggaaggg
gccatgcggctgaagaagctgcccgccttggtggccggtatgggcatgcccgctgtcgcc
ctgaccgataccgacaacatgttcgccgcgctggagttttccgtcggcgcggcagaggct
ggcgtgcagcccatcgtcgggtgtcaggtgtccgtcggctatggtgccgtgcccggtcgt
gggggcgtgtcgatgcctgcgccgctggttctgctggcgcagtcggaagcgggctacgag
aacctgatgaagctgaactcccagctttatctggagggggatcgctcggtcccgcaggtg
tcgctggaggatctggcagcacatggtgacgggctgatctgtttgtctggcggccccgaa
gggcccgttggcaagctgttgcaggcgggtcagcgcgacaaggcagaggcactgttgacg
cggctggctgcgatctatccccagcgcttgtatgtcgagttgcagcgccatccgggcgac
gggggcgcattgccagaggccgagcgcgcgaccgagcgtggccatgtagagatggcttac
gccatggacctaccgctggtcgccaccaacgatgtctacttccccaagcccgatatgtac
gaggcgcacgacgcgctgatctgtatcgcggacggcgcgtatgtggaccagaacgagcca
cgccgccgtctgacgccccagcactacctcaagtccccgtcagagatgtgcgcgttgttc
gccgatctgccggaagcgaccgcgaacaccgtcgaaatcgcgcgccgatgtgccttcgcc
acctaccgccgcgacccgatcctgccgaagttcgccgacgacgaggtggacgaactgcgc
cgccaggccattgagggcctgaaggagcggctggcggtcatcccccatgccgccccggtt
gaggagtacgagaagcggctggaattcgagcttggcattatcgagggcatgggctttccc
ggctacttcctgatcgtggccgacttcatcaagtgggccaaggagcaggacattccggtc
ggtccgggccgtgggtcgggggcggggtcgctcgtggcctacgcactgacaatcaccgac
cttgaccccttgcgctattcactgctgttcgagcggttcctgaaccccgagcgtgtgtcg
atgcccgacttcgacatcgacttctgcatggatcgccgggaagaggtgatccgctacgtc
caagagaagtacggtcgcgacaaggtcggccagatcatcaccttcggcgcgctgctgtcc
aaggccgccgtgcgcgacgtgggccgcgttttgcagatgccgtatgggcaggtggaccgc
ctgtcgaagatgattccggtcgagggcgtgaagcccgtgtccatcgcgcaggccctgcgg
gacgagccgcggttgcgggaagaagcgcgcaacgaagaggtcgtaaagcgattgctggac
tacggccaacaggtcgaagggctgctgcgcaacgcctcgacccacgcggccggtgtagtg
atcggggatcgtccgctggacgcgctggtgccgctctaccgcgatccgaaatccgacatg
cccgccacccagttcaacatgaaatgggtcgaacaggcgggcttggtgaagttcgacttt
ctgggtctgaagacgctgacggtgattcagaacgcggtcgacctgatcaaccagtcgcgc
cccattcacatcggcccgaacggcgaggaactctacgcccccgcagacggtgccgagaac
cagatgaacctgattcctctggacgacgagaaatcctatcagctttacgcccgcgccaag
acggtcgccgtgttccaggtggaatccaccggcatgatggacgccctgcgccgcatgaaa
ccaacctgcatcgaggatatcgtggctctggtggcgctctaccgccccggcccgatggag
aatattccgaagtattgcgaggtgaagaacggcctgtcggaacgcgacaagctgcacccc
acggtcgatcacatcctggacgagacgcagggcatcatcgtctaccaggagcaggtgatg
cagatcgcgcaggagatggccgggtatagccttggcggcgccgacctgctgcgccgcgcc
atgggcaagaaaatccaggccgcgatggatgccgaaaagccgaagtttcttgccggtgcc
aaggaaaacggggtggatgagaccaccgcgatggacacctgggcgctgctcgacaagttc
gccaactatggtttcaacaagtcccacgccgcagcctatgcagtcgtcagctaccagacc
gcatggctcaaggcgaaccacccggtcgagttcatggccggcgtttgcaactgcgatatc
cacctgaccgacaagctggccgtctacatcgaagaggcccggcgcggcctgtcgatagag
atcgtgcccccctgcgtgaaccgctcgatcgagaccttcagcgtggatcagggccggatc
gtctacggtttgggtgcgctcaagaacgtcggtctggacgcgatgcggctggtcgtcgaa
ggtcgcaccgaaggggcgcaggatggacgcgacgggaaaccgttcgccacactctacgac
atggcccgccgcgtcgatctcaagcggatcggcaagcgcccgctagagatgctcgcgcgg
tccggcgcattcgaccagctcgatccgaaccgccgccgcgtgttcgacagccttgatgcg
ctggtcggctattccgctgcgatccatgagcagaaatcgtccaatcaggtctcgctgttc
ggagaggcgggcgacgacttgccggaaccgcgtctatcaccggtagacgactggctgccc
accgaacggttggccgaagagcacaccgccatcggcttctacctgtcgggccatccgctg
gacgactatatgggcgcgctgaaacgccagaaggtgatgacgctggagcaggtccacgaa
cgtgcgctagccggtccgcacgtggccaagatggctggcgtcgtggccagccgacaagaa
cgcaagtccgcgcgcggcaaccgctttgcctttatcggcctatccgatccgtcgggcctc
tacgaggtcacgatcttctcggacacgctggaagcgtcgcgtgagtatctggagccgggc
accaatgtcgttgttcaggtcgaagcgacgatggaaagcgaacagctcaaactgctgggc
cgctccatcgcgcccatcgacagcgccgttgcggatgcgggaacctctggtctgatggtc
tatctggacgcgcccgaagccgtgggctccatcgcgagcgtgctggaccgcgcccgcgag
gatcgccagatccgcacccgcggtccggtcaagctgtgcctgatggaaagcggcttgccc
ggagaggtcgaagtcgaactgggcgacgacttccccctgacgccgaaaatcaaaagcgcg
ctgaaatcactgggcggcgtgatgaccgtagaggatctgtag
DBGET
integrated database retrieval system
