Palleronia sp. THAF1: FIU81_05590
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Entry
FIU81_05590 CDS
T06247
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru00053
Ascorbate and aldarate metabolism
maru00520
Amino sugar and nucleotide sugar metabolism
maru01100
Metabolic pathways
maru01240
Biosynthesis of cofactors
maru01250
Biosynthesis of nucleotide sugars
Module
maru_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
FIU81_05590 (rfbB)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
FIU81_05590 (rfbB)
Enzymes [BR:
maru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
FIU81_05590 (rfbB)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
adh_short_C2
DUF5790
Motif
Other DBs
NCBI-ProteinID:
QFU08141
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Position
complement(1087607..1088623)
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AA seq
338 aa
AA seq
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MSRRVLITGTAGFIGFHLARLLLSEGFTVHGYDGMTDYYDVRLKQRRHQILMQTEGFGAT
EGMLEDDDLFQKTADDFEPDVIVHLAAQAGVRYSLENPRAYIDANVVGTFNVMEAARRHE
VDHLLMASTSSVYGANTDMPFVETHKADTPLTIYAATKKANEAMGHSYAHLWNLPTTMFR
FFTVYGPWGRPDMALFKFVDAIQNGRPIDIYNNGDMHRDFTYVEDLVNGIRLLIDAAPVR
PEPDAEIPEWDSLSPVAPWRVVNIGNSDTVRLLDFVEAIEDCMGMKAQRNYMEMQKGDVP
ATWADATLLRELTGYRPQTDVRDGIAKFVAWYRAYYDV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacgcgtcctgatcaccggaaccgccggtttcatcggcttccatcttgcccgg
ttgctgctgtccgaaggcttcaccgtccacggctacgacgggatgaccgactactacgac
gtgcgcctgaagcagcgccgccaccagatcctgatgcagaccgagggcttcggcgccacc
gagggtatgctggaagatgacgacttgttccagaagaccgcagacgacttcgaacccgac
gtgatcgtccacctcgccgcgcaagctggcgtgcgctacagccttgaaaacccccgcgcc
tatatcgacgccaatgtcgtcggcaccttcaacgtcatggaagcggcgcggcggcacgag
gtcgatcacctgctgatggcctcgacctcttccgtctacggcgcgaacaccgacatgccc
ttcgtcgagacgcataaggccgacacgccgctgaccatctacgccgccacaaagaaggcg
aacgaggcgatgggccattcctacgcccacttgtggaacctgccgaccacgatgttccgc
ttctttaccgtctacgggccatggggacggcccgatatggcgctgttcaagttcgtggac
gccattcagaacggtcgccccatcgacatctacaacaatggcgacatgcaccgggatttc
acctacgtcgaagaccttgtgaacggtatccgcctgctgatcgacgccgcccccgtgcgg
cccgaacccgacgccgaaattccagaatgggacagcctgtcgcctgttgccccgtggcgc
gtggtgaatatcggcaactcggacacggtgcgccttctggatttcgtcgaggcgatcgag
gactgcatggggatgaaggcgcagcgcaactacatggagatgcagaaaggcgacgtgccc
gctacatgggccgacgcgacgctgctgcgtgagttgacaggctatcgccctcagaccgac
gtacgcgacggcatcgcgaagttcgtggcatggtatcgcgcgtactacgacgtttga
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