Palleronia sp. THAF1: FIU81_06745
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Entry
FIU81_06745 CDS
T06247
Symbol
rhlE1
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
maru
Palleronia sp. THAF1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QFU08368
UniProt:
A0A5P9J9F3
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Position
complement(1308313..1309839)
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AA seq
508 aa
AA seq
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MTKFSDLKLGPKVQKAIDEAGYTEPTPIQAQAIPAALEGRDVLGIAQTGTGKTASFTLPM
ITQLARGRAKARMPRSLVLAPTRELAAQVAENFDTYSKHVRLTKALLIGGVSFKEQDQLI
DKGVDVLIATPGRLLDHFERGKLLLTDVKIMVVDEADRMLDMGFIPDIERIFSLVPFTRQ
TLFFSATMAPEIERITNTFLSNPHRVEVARQASASETIEQGVAMFRPSRKDRAASEKRKL
LRQLIDAEGDKLTNAIIFCNRKSDVDIVAKSLTKYGHECAPIHGDLDQSVRTRTLDGFRA
GNLRILVASDVAARGLDVPSVSHVFNFDVPGHAEDYVHRIGRTGRAGRDGKAITLCQPSD
EKNLEDVERLLQKEIPRLDTGAAPAPAEPEALKADAEETPKPRRTRSRSRKPAAEAKADA
PVATEAPAAEAPKPEATPEPTPAPQTEPVAAAEADKPQERSRGGRNRRGGSGGGRRDGSN
GGNGAQVVGMGDHMPTFIEKSFEERMDG
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaattcagcgacctgaagctgggccccaaggtccagaaagccatcgacgaagcc
ggctacacagagccgacccccatccaggcgcaggcaattcccgccgcgcttgaaggccgc
gacgttctgggaatcgcccagaccggcaccggcaagacagcctctttcacgctgcccatg
atcacgcaactggcgcgcggccgggccaaggcgcggatgccgcgcagccttgtgctggcc
cccacgcgtgaactggccgcacaggtggccgagaacttcgacacctactccaagcacgtg
cgcctgacgaaggctctgttgatcggcggcgtatccttcaaggaacaagatcagttgatc
gacaagggcgtcgacgttctgatcgccacgccgggccgccttctggaccatttcgagcgt
ggcaagctactgctgaccgacgtgaagatcatggtcgtggacgaagccgaccggatgctc
gacatgggattcatcccagatatcgagcgcatttttagcctcgtgccctttacccggcaa
acgctgttcttctcggccaccatggcgccagagatcgagcggatcaccaacaccttcctg
tcgaacccgcaccgggtcgaagtcgcgcggcaagcctctgcctcggaaacgatcgagcaa
ggcgttgcgatgttccgcccgtcgcgcaaggaccgtgccgccagcgaaaagcgcaaactt
ctccgtcagctgatcgacgcggaaggcgacaagctgaccaacgcgatcatcttctgcaac
cgcaagtcggacgtggatatcgtcgcgaaaagcctgaccaaatacgggcatgagtgcgcg
ccgatccacggcgatctggatcaatccgtgcgtacccgtacgcttgacgggttccgcgcg
ggcaatctgcgcatcctcgtggcgtctgatgtcgccgcgcgcggtcttgatgtgccttcg
gtcagccacgttttcaacttcgacgtgccgggccatgccgaggattacgtgcaccgcatc
ggccgcacgggtcgcgcgggccgcgacggcaaggccatcacgctgtgccagccgtccgac
gagaagaacctggaagacgtggaacgcttgctgcaaaaagagatcccgcgtctcgacact
ggcgcggctccggcccccgcagaaccagaagcgttgaaggccgacgccgaagagacaccg
aagccccgccgcacgcgcagccgcagccgcaagccggccgcagaggcgaaagccgacgct
ccggtcgcgaccgaggcacctgccgctgaagcacccaagccagaggcaacgccggaaccg
acacccgcgccgcagaccgagcctgttgcggccgcagaagccgataagccgcaagagcgt
agccggggcggtcgcaaccgtcgtggtggcagcggcggcggtcggcgtgacggcagcaac
ggtggcaacggtgcacaggtcgtcggcatgggcgatcacatgccaaccttcatcgagaaa
agctttgaagaacggatggacggctag
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