Palleronia sp. THAF1: FIU81_08280
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Entry
FIU81_08280 CDS
T06247
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maru03009
]
FIU81_08280 (rluD)
Enzymes [BR:
maru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FIU81_08280 (rluD)
Ribosome biogenesis [BR:
maru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIU81_08280 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QFU08669
LinkDB
All DBs
Position
complement(1617867..1618886)
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AA seq
339 aa
AA seq
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MGQRRLSVTIGADPPPRLDKALARDVPEDAHLSRSRIARLIEDGAVARDGAALTSAKARV
AEGDVIEIAVPIEAETHMLPEDIPLDIVHEDDDLIVVNKPAGMVVHPAPGSPSGTLVNAL
LHHFGDTLSGVGGEKRPGIVHRIDKDTSGLLVVAKTDRAHHALAAQFAAHTVGREYRALC
HGVPSPGDPRLMGTRGVSAEDGGVIRITTRLNRHPSDRQRQAVTFEGGRHAVTRITVLEK
YQSVALVSCRLETGRTHQIRVHMRHVGHALVGDPVYGGSRTASVRIGPNAARAVNAFPRQ
ALHATTLGFTHPNGEEMLFTSDLPRDLGALVELLPDTTL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggccagcgtcgcctttccgtcaccatcggggccgatccgcccccgcgtctggataag
gcactcgcccgagacgtgccagaggacgcgcatctgtcgcggtcccgcatcgcccggctg
atcgaggatggcgccgtggcgcgcgacggagcggccctgacctcggccaaggcgcgcgtg
gcagagggcgacgtgatcgagatcgccgtgccgattgaagcggaaacccacatgctgcca
gaggatattccgctggatatcgtgcatgaggacgacgacctgatcgtggtgaacaagccc
gcaggcatggtggtgcatccggcccccggcagcccgtccggtacgctggtcaacgcgctt
ttgcaccatttcggcgacaccctgtccggggtcggcggcgaaaagcgccccggcatcgtg
caccgcatcgacaaggataccagcggcctgcttgttgtcgcgaagaccgaccgcgcccac
catgcgctcgccgcgcaattcgccgcccataccgttggacgggagtatcgcgccctgtgc
cacggcgtcccgtcgccgggcgatccgcgcctcatgggcacgcgaggggtaagcgcagag
gacggtggcgtaatccgcatcaccacgcgcctgaaccgccatccgtcggaccgtcagcgg
caggcggtgacgttcgagggcgggcgccatgccgtcacacggatcaccgtgctggaaaaa
tatcagtccgtggccctggtctcgtgccgtctggaaacggggcggacgcatcagatcagg
gtgcacatgcgccacgtcggccatgccctggtcggcgatccagtttatggcggtagccgc
acggcctctgtgcggatcggcccgaatgccgcgcgtgccgtgaacgcctttccccggcag
gcgctacatgcgacaacgctggggttcacccacccgaacggtgaagaaatgttgtttacc
agtgatttgccgcgcgatcttggggctttggttgagcttctgcctgacacaaccctgtga
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