Palleronia sp. THAF1: FIU81_09320
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Entry
FIU81_09320 CDS
T06247
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maru03032
]
FIU81_09320 (gyrA)
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_09320 (gyrA)
Enzymes [BR:
maru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FIU81_09320 (gyrA)
DNA replication proteins [BR:
maru03032
]
Prokaryotic type
DNA Topoisomerases
FIU81_09320 (gyrA)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIU81_09320 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FhuF
Motif
Other DBs
NCBI-ProteinID:
QFU08870
UniProt:
A0A5P9JAA3
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All DBs
Position
1826717..1829485
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AA seq
922 aa
AA seq
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MSDTPEPPENMDDNAPEGPRHDGPTINIADEMKASFLDYAMSVIVSRAIPDLRDGLKPVH
RRILFAMHEAGNSHDKAYRKSARPVGDVMGQYHPHGDSAIYEALVRMAQDFSMSLPLLDG
QGNFGSMDGDNPAAMRYTEVRMDKPARALLDDIEKDTVDFQDNYDGKQQEPTVLPARFPN
MLVNGAGGIAVGMATNIPPHNLGEVIDGTLALIENPDLSSEALMDIIPAPDFPTGAQILG
RSGARKAYLEGRGSVIIRAKTHVEEVSKGREAIVIDEIPYQVNKARLVEQIADLVREKRL
EGISAVQDESDRVGVRVVVELKRDATADVVLNQLYRFTTLQTSFGCNMLALHGGRPEQLT
LRDFLTHFIAFREDVVARRTAFELRKARERAHVLCGLAVAVSNVDEVVATIRASADAPEA
RVKLMERRWPAAEIAPFIRLIDDPSHTMNDDGTYNLSEAQARAILELRLQRLTQLGVKEV
TDELEELAGKIKDYLDILRSRERIMQIISDELHEVRTQFAVPRRSEIIDWSGDMEDEDLI
EREDMVVTVTAGGYIKRTPLADFRSQRRGGKGLSGAGLKEEDVVTTLFVANTHTPLLVFT
TTGMVYKLKTWRLPLASRTGRGKAMVNILPIDPGTSIAAIMPVDRAEEDWDELQIVFATS
SGDVRRNALSDFTNVMRNGKIAMKLPEAVEGKPEVTLVNARIASEADDVMLVTALGRAIR
FPTTAVRVFKGRDSTGVRGIRLADGDSVVSMAVIRHFEASAQERATYLKMRRAMAGLVEE
PEADDDEEPGVEAADFSQERYAEMSAAEDLILTITSQGSGKLSSSHDYPVRGRGGQGVMA
MDKAMRGGPLVASFPVDMDDQIMLATSKGQSIRVPIEGISFRSRGAGGVKVFNTGNDEEV
VSVAWIADQPDDEADPDAPLDA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacacgcccgaaccccctgagaacatggacgacaacgcacccgagggtccgcgt
cacgacggtccgacgatcaacatcgccgacgagatgaaggcgtcttttctcgactatgcg
atgtccgtcatcgtcagccgcgccattcccgatctgcgcgacgggcttaagcccgtccac
cgccgcatcctgttcgccatgcacgaggccgggaacagccacgacaaggcatatcgcaag
tccgcccgcccggtcggcgacgttatgggtcagtatcacccgcatggtgacagcgcgatc
tacgaggcgctggtgcgtatggcgcaggacttctccatgtcgctgccgttgctggatggt
cagggcaactttggctcaatggatggtgataaccccgccgccatgcgctacacagaagtc
cgcatggacaagcccgcgcgcgcgctgctcgacgatatcgagaaagataccgtcgacttc
caggacaactatgacggcaagcagcaggaacccacggttctacccgcccgcttcccgaat
atgctggtcaacggcgcaggcggcatcgcggtgggcatggcgacgaacattccgccccac
aatctgggcgaagtgatcgacgggacgctggccttgatcgagaatccggacctgtcgtcc
gaggcattgatggacatcattcccgcccccgatttccccaccggcgcgcagattctgggc
cgttcgggcgcgcgcaaggcttatctcgaaggtcgcggtagcgtcatcatccgcgcgaag
acccatgtggaagaggtctcgaaaggccgcgaggccatcgtcatcgacgagattccctat
caggtgaacaaggcgcgactggtcgaacagatcgccgatctggtccgcgaaaagcggcta
gaaggcatctctgcggtccaagacgaatccgaccgtgtcggcgtgcgcgtcgtcgtcgag
ctgaagcgtgatgcgaccgccgatgtggtgctgaaccagctgtaccgtttcaccacgctg
cagacctctttcgggtgcaacatgttggcgttgcatggcggtcggcccgagcaactgacg
ttgcgcgatttcctgacgcacttcatcgcattccgcgaagacgtcgttgcgcgccgcacc
gcgttcgaactgcgcaaggcgcgtgagcgtgcgcatgttctgtgcggtctggccgtcgcg
gtgtcgaacgtggatgaggtcgtcgcgaccatccgcgcatcggcagacgcacctgaagcg
cgcgtcaagctgatggagcgtcgctggcccgctgcagagatcgcgcctttcatccgcctg
atcgacgacccgtcgcatacgatgaacgacgacgggacgtataacctgtccgaagcgcag
gcccgcgcaatcctggagctccgattgcaacgcctgacccaacttggcgtcaaggaagtc
acggacgagctggaagagctagcgggcaaaatcaaggactaccttgatatcctgcgctcg
cgcgagcggatcatgcagatcatatctgacgagctgcacgaggtccgaacccagttcgcc
gtgccgcgtcggtccgagatcatcgactggtccggcgacatggaagacgaagacctgatc
gagcgcgaagacatggtcgtcacggttaccgccggcggctacatcaagcgcacgccgctg
gctgatttccgctcgcagcgccgtggtggcaaagggctttccggggctgggctgaaagaa
gaggacgtggtcaccaccctcttcgtggccaacacgcacaccccccttctggtcttcacc
actactgggatggtctacaagctgaagacgtggcgcttgccgctggcgtcccgcaccggg
cgcggtaaagccatggttaacatccttcccatcgatcccgggacgtcgatcgcagccatt
atgccagtggatcgcgcggaagaggattgggacgaactgcagatcgtcttcgcgacgtct
tccggcgatgtgcggcgcaacgcactgtcggacttcaccaatgtcatgcgcaacggcaag
atcgcgatgaagctgccagaagcggtcgaaggcaaaccggaagtcaccctggtgaacgcg
cgcatcgcctctgaagctgacgatgtgatgctggtcaccgcgcttggacgcgcgatccgg
ttcccgacaacggcggtccgtgtcttcaaggggcgcgactccactggcgtgcgcggtatc
cgcttggccgacggcgacagcgtggtctccatggccgtgatccgtcacttcgaggcatcc
gcgcaggaacgtgcaacctacctgaagatgcgccgcgccatggccggactggtcgaagag
cccgaagccgacgacgacgaggaaccaggcgtcgaagccgctgacttcagccaggaacgc
tatgccgagatgtccgcagcagaggatctcatcctgacgatcacctcacagggctcgggc
aagctatcctccagtcacgattaccccgtgcgcggacgcggcggtcagggtgtcatggcg
atggacaaggcgatgcgtggcggccctctggtagcatctttcccggtggatatggacgat
caaatcatgttggccacctccaagggtcagtcgatccgcgtgccgatcgagggaatttcg
ttccgcagccgcggtgcaggcggcgtgaaggtattcaacaccggaaatgatgaagaagtc
gttagcgtggcgtggattgccgatcagcccgatgacgaagccgatcccgacgcgccgttg
gacgcttga
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