Palleronia sp. THAF1: FIU81_09780
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Entry
FIU81_09780 CDS
T06247
Symbol
xthA1
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU81_09780 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_09780 (xthA1)
Enzymes [BR:
maru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FIU81_09780 (xthA1)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FIU81_09780 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QFU08961
LinkDB
All DBs
Position
1922108..1922887
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AA seq
259 aa
AA seq
DB search
MKIASFNINGVKARLPALLDWLKDSAPDVACLQEIKSVDEGFPRSEIEDLGYTVETHGQK
GFNGVAILSKLPVEDVTRGLPGDETDEQARYIEATVIGDTAIRVCGLYLPNGNPAPGPKY
DYKLAWMARLEDRMRAHLAEETAAVFCGDYNVIPDDRDAARPDAWRKDALALPQSRAAFH
RMTHLGLTEAFRARNQQAGHFTFWDYQANAYDRNDGIRIDHHLLTPQAADLLEDVWIEKE
VRGREKPSDHVPVWIELRA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccagcttcaatatcaacggcgtgaaggcgcgcctgcccgccctgctcgac
tggctgaaggacagcgcgccggacgtagcctgcctgcaagagatcaaatcggtggatgag
ggctttccccgttcagagatcgaagacctcggctacaccgtagaaacacacggtcaaaag
ggtttcaacggcgtcgcgatcctgtcgaagctccccgtggaggacgtgacgcgcggcctc
ccgggcgatgagaccgacgaacaggcccgttatatcgaagccaccgtgatcggcgacacg
gcgatccgtgtttgcggcctgtatctgcccaacggcaaccccgcgccgggtccgaagtac
gactacaaactggcatggatggcccggctggaagaccgcatgcgcgcgcatctggcagaa
gagactgccgccgtcttctgtggcgactacaacgttatcccggatgatcgcgacgccgcc
agacccgacgcttggcgcaaggacgcgctggccctgccccaaagccgtgccgcgtttcac
cggatgacgcatcttggccttaccgaagccttccgcgcccgcaaccagcaggcggggcat
ttcaccttttgggactatcaggcaaacgcctatgaccggaacgatggtatccgcatcgac
caccacctgctgacccctcaagccgctgatctgcttgaagatgtgtggatcgaaaaagag
gttcgcggtcgtgagaaaccgtccgaccacgtgccggtctggatcgaactccgggcctga
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