Palleronia sp. THAF1: FIU81_10200
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Entry
FIU81_10200 CDS
T06247
Symbol
msbA2
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU81_10200 (msbA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
maru02000
]
FIU81_10200 (msbA2)
Enzymes [BR:
maru01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FIU81_10200 (msbA2)
Transporters [BR:
maru02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FIU81_10200 (msbA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_29
MMR_HSR1
AAA_22
AAA_30
AAA_14
SLATT_1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QFU09045
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Position
2009932..2011686
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AA seq
584 aa
AA seq
DB search
MFNNRTPNQAFAHMGRLWRDYVRPHRWWLAFAAVLMMIEGSTVGLLSWMLKPMFDRVLVG
GEASAIWWVGLAILSLFVVRAVTGVVSQIIMSRVALKTATTMQVDLLAHLTTLDMSYFQD
NAPGALIERVQGDTAAVQRIWLSVIQAAGRDTVALGSLLVVALSIDWIWTLAALVGVPLL
IGPMVVLQRYVRNKTKQTRNTSYERAKRLDEIFHGIGAVKLNGMERYQVSRFDTLVRRIV
RAEVRSTAGRATMPGLIDVMTGVGFFAVLILGGAEIVDGTKTVGDFMSFFAAMILTFQPL
RRLSTLAGSFQVAAISLDKIYSTFDLKPKVSGATKPPASGLPAPRVELSGVTLSYGDTQV
LTDAGFVSEAGRVTALVGASGAGKSTIFNVLTRMAEPDSGATYINGTNITDMELGDLRAL
MSVVTQDALLFDETIRENITVGREVSDADLRAAVEAAHVSDFTDTLPDGLDTLAGPRGSA
LSGGQRQRVAIARAILRDTPILLLDEATSALDARSERLIQTALEHASQGRTTLVIAHRLA
TIRDAHKIVVMDMGRVVEQGTHEELLEAGGRYADLYHLQFKDED
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaccgcacgccaaatcaagccttcgcacatatggggcgcttgtggcgggac
tacgtccgcccacaccgctggtggttggccttcgcagccgtcctgatgatgatcgagggt
tcgactgtgggcctgctcagctggatgctgaagcccatgttcgaccgtgtattggtcggc
ggagaagccagcgcaatctggtgggtggggcttgcgatcctcagcctttttgtcgtgcgg
gccgtcacaggcgttgtgtcgcagatcattatgtcacgagtggcgctgaagacggcgacg
acgatgcaggtcgacctgttggcgcatctgacaacgctggacatgagttacttccaggac
aatgcccccggcgccctgatagagcgcgttcaaggcgacacggcggccgttcagcgtatc
tggctgtcggtcattcaggccgccggtcgcgacacagtggctttgggatcgctgctcgtg
gttgctctctcgatcgactggatctggactttggcggccttggtcggtgtgccactgttg
atcgggccgatggtggtgctgcagcgctatgtgcggaacaagacgaagcagacgcgcaat
acctcttacgagcgcgcaaagcggttggacgagatcttccacggcatcggcgcggtgaag
ctgaacgggatggagcgctatcaggtcagccgcttcgacacgttggtgcggcggatcgtg
cgcgccgaagtccgctcgaccgccggtcgcgccaccatgcccggcctgatcgacgtgatg
accggagtgggcttcttcgccgtcttgatcctgggcggagccgaaatcgtagacggcacg
aagacggtcggtgacttcatgtccttcttcgcggcgatgatcctgacattccagcccctg
cgccgtctcagcacgcttgcggggtcgttccaggtcgccgcgatctcgttggacaagatc
tacagtacctttgacctcaagccgaaggtgtccggagccaccaagcccccggccagcggc
cttcccgccccgcgggtcgagcttagcggggtcaccctgtcctacggcgacacgcaggtg
ctgaccgacgcgggcttcgtgtcagaagccgggcgcgtcaccgcattggtcggtgcgtcg
ggggccggcaaaagcaccattttcaacgtgctgacccgcatggccgagccagacagcggt
gccacatacatcaacggcacaaacatcaccgacatggagttgggcgaccttcgcgccctg
atgtcggtcgtcacgcaagacgccctgctgttcgacgaaaccatacgcgagaacatcacc
gtgggccgcgaggtctcggacgcggatctacgggccgcagtggaggccgcgcatgtgtcg
gacttcaccgacaccctgcccgacggcttggacacccttgccggtccgcgtggatcggcc
ttgtcgggtggccagcggcaacgggtcgctatcgcccgcgccattctgcgcgacacgccg
atcctgctgctggacgaagcaaccagcgcgctcgacgcaaggtccgagcggctgatccag
acggcgctggagcacgcgtcacagggccgcacgacgttggtgatcgcgcatcggctggcc
acgatccgcgacgcgcacaagatcgtcgtgatggatatgggccgcgtcgtcgaacagggc
acgcatgaagagctccttgaagcgggcggccgctatgccgacctctatcatctgcaattc
aaggacgaggactag
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