Palleronia sp. THAF1: FIU81_11455
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Entry
FIU81_11455 CDS
T06247
Symbol
rsmH
Name
(GenBank) Ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maru03009
]
FIU81_11455 (rsmH)
Enzymes [BR:
maru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
FIU81_11455 (rsmH)
Ribosome biogenesis [BR:
maru03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FIU81_11455 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QFU09291
LinkDB
All DBs
Position
complement(2267867..2268850)
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AA seq
327 aa
AA seq
DB search
MSAPGPPHIPVLLTPILQACAPITGTWVDGTFGAGGYSMGLLAAGADTVIGIDRDPSVFP
MAAEWSGVYGDQLRLVEGVFGELDTLAGDPVDGVVLDLGVSSMQLDQAERGFSFMRDGPL
DMRMGTDGPTAADLVADLPEGKLADVLYQYGEERASRRIAKKLVAERAHGRIVTTGQLAR
IVEGLLPRPKPGQSHPATRTFQALRIAVNDEFGQLVAGLEAAERALKPGGWLAVVTFHSM
EDRVVKRFLQQRGGKVGGGSRHAPVTEQPDPRFTELSRGIAADHTEVDANPRARSARLRI
ARRTDAPAGPVDRTTLGLPALTLKDEL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcccggccccccgcacatccccgtcctgttgacgccgatcctgcaagcctgc
gcgccgatcaccggcacgtgggtcgatgggacgttcggggcagggggctattccatgggt
ttgctggccgccggggctgatacggtcatcggcattgaccgcgatcccagcgtcttcccc
atggccgcggaatggtccggggtctacggcgaccagttgcgtcttgtcgaaggcgtcttc
ggcgaacttgacacccttgcaggcgatcctgtggatggcgttgtgctggaccttggcgtt
tcttccatgcagctcgatcaggcggaacgcggcttttcgttcatgcgcgacggtccgctg
gacatgcgcatgggcaccgacggccccacggcggctgaccttgtggccgatctgccagaa
ggaaagttggccgatgtcctttatcaatacggcgaagagcgtgcctcacgccggatcgcc
aagaagctggtggccgaacgtgctcatggaagaatcgtgacgaccggacagcttgcgcgc
atcgtcgagggcctcttgccgcgccccaagccgggccaaagccatcccgcgacccgcaca
ttccaagccctgcgcatcgcggtgaacgacgaattcggccagcttgtcgccgggctggaa
gccgccgagcgtgcgttgaagccgggcggctggttggccgtcgtgacgtttcattcgatg
gaagaccgcgtcgtcaaacgcttcttgcaacagcgcggtggcaaagtggggggtggcagc
aggcacgcacccgtcaccgaacaacccgacccgcgcttcacagagctttcgcgcggaatc
gcggcggatcatacggaagtcgacgccaatccccgtgcgcgatccgcgcggctgcgtatt
gcccggcgcaccgacgcgcccgccgggccggtggatcgcacgacgttgggcttgcccgct
ctgacactgaaagacgagctatga
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