Palleronia sp. THAF1: FIU81_11815
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Entry
FIU81_11815 CDS
T06247
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maru03016
]
FIU81_11815
Enzymes [BR:
maru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FIU81_11815
Transfer RNA biogenesis [BR:
maru03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FIU81_11815
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
QFU09361
UniProt:
A0A5P9JB87
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All DBs
Position
2335409..2335951
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AA seq
180 aa
AA seq
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MRCFLALDPPDTLRDALAALQDGLRVGRLVDEDDLHLTLAFMGDMELDALDELNLDLEML
RPGPVRIEVTGLDTFGSINPRSLHASARPHPELDHLNRKVETLVRRAGHPLPHHRFVPHI
TLARFRHRMPPEDHVKLGRFLSAHGNFRFDPVSVDRLMLYQSTLTDDGPRYDLLEEYALA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgtttccttgcactcgacccgcccgacactcttcgtgacgcccttgccgctttg
caggacggcctgcgcgtggggcggttggtggacgaggatgatctgcacctgacgctcgcc
ttcatgggcgacatggagcttgatgcgctggacgagctgaacctcgatctggagatgctg
cgcccgggccccgtgcggatcgaggttacggggctggatacgttcggatcgatcaaccca
cggtcgctgcacgcctcggcccgcccgcatcccgaactggaccacctgaaccgcaaggtt
gaaacgctggtgcgccgtgcaggccatcccctgccccaccaccgcttcgtcccgcacatc
acgctcgctcgctttcgccaccggatgccgccggaggatcatgtgaaactgggccgcttc
ctgtcggcccacggcaacttccgtttcgacccggtcagcgtggaccggctgatgctgtac
cagtcgaccctgaccgacgacggcccgcgctatgatctgctggaagagtatgcgctggcc
tga
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