Palleronia sp. THAF1: FIU81_14485
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Entry
FIU81_14485 CDS
T06247
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maru03016
]
FIU81_14485 (truB)
Enzymes [BR:
maru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIU81_14485 (truB)
Transfer RNA biogenesis [BR:
maru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIU81_14485 (truB)
Prokaryotic type
FIU81_14485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QFU09882
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Position
2828807..2829706
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AA seq
299 aa
AA seq
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MGRRKGREISGWLIVDKPAGMGSTDVVNKVRWAFDAKKAGHAGTLDPDATGVLAVALGEA
TKLVSSITDALKCYDFTLRWGAETTTDDASGEVMETSDMRPTRAAIEAALPAFVGDIQQV
PPSVSAVKVDGERAYDLARQGERPELAARDLYVDELTLLDADDDTATLRLVCGKGGYVRA
IARDLGRALGGHAHVVTLRRTWSGPFDQADAVGMDRIEELAKSPEIDALLQPVEAGVSDL
PRCHVTEMAATRIRNGNPAEVVGTDAEFGDLTWAAHQGRIVALGHYKAGHFHPSRVLNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacgcaagggacgcgagatttcggggtggttgatcgtcgataagcccgcgggc
atgggctcgaccgacgttgtgaacaaggtgcgctgggcgttcgatgcaaaaaaagcaggc
catgcgggcacgctggacccggacgcgacaggcgttctggcggtggcgctgggcgaggcg
acgaagctggtgtcctccatcaccgatgcgctgaaatgctacgatttcaccctgagatgg
ggcgccgagacgacgaccgacgatgcctctggcgaggtgatggaaacgtccgacatgcgg
cccacgcgggccgcaatagaagccgcgttgccagccttcgtgggcgacattcaacaggtg
ccgccctcggtgtcggcagtaaaagtcgatggtgagcgcgcctacgatctggcccgccaa
ggcgagcgccccgaactcgccgcccgtgatctttatgtggatgagctgactctcttggac
gctgacgacgacaccgcaaccctgcgtctggtctgcggcaagggcggctacgttcgcgcc
atcgcccgcgacctcgggcgcgctttgggcggtcatgcgcacgtggtcactttgcggcgc
acgtggtccggtccgttcgatcaggccgatgccgtgggcatggaccgtatcgaggaactg
gcgaagtcacccgaaatcgacgcgcttttgcagcctgtcgaggccggcgtgtccgacctg
ccgcgctgccacgtgaccgaaatggccgcgacccgcatccgcaacggcaacccggcagag
gtcgtcggcaccgacgccgaattcggcgatctgacatgggcggcgcatcaggggcggatc
gtggcgctgggtcactacaaggctgggcatttccacccgagccgcgttctgaacctttga
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