Palleronia sp. THAF1: FIU81_14675
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Entry
FIU81_14675 CDS
T06247
Symbol
xthA2
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU81_14675 (xthA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_14675 (xthA2)
Enzymes [BR:
maru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FIU81_14675 (xthA2)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FIU81_14675 (xthA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
FxSxx-COOH
Motif
Other DBs
NCBI-ProteinID:
QFU09920
LinkDB
All DBs
Position
complement(2862751..2863542)
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AA seq
263 aa
AA seq
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MPFTICTWNINSVRLRAGLVERLLAEDAPDVLCLQECKSPVDKLPSFEALGYGHCIARGQ
KGYNGVAILSKVPLREVSALDHADLGHARHVSAALPNGVVIHNYYVPAGGDVPDREVNEK
FGQKLDYLTDMRDAFRAEVPERSILVGDLNIAPREDDVWDHKKLLKIVSHTPVEIAALGE
AQEAGGWVDVTRADIPEGKLYSWWSYRAKDWDAADKGRRLDHLWATPDIAGAAYGSRVRR
DARGWEKPSDHAPVFATFDLPLA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttgcctttcacgatctgcacctggaacatcaactcggtccgtttgcgcgccggcctggtc
gaacgtctgttggccgaggacgcgcccgacgtgctgtgcctgcaagagtgcaagtcgccg
gtggacaagctgccctcgttcgaggcgctgggctacggccattgcatcgcacgcgggcag
aagggctacaacggcgttgcgatcctgtcgaaggtgcctttgcgcgaagtgtcagcattg
gatcatgccgatctgggtcacgcgcggcacgtgtcggcggccctgccgaatggcgtcgtg
atccacaattattacgtccctgcgggcggtgatgtgccggaccgcgaggtgaacgagaag
ttcgggcagaagctggattacctgaccgacatgcgcgacgccttccgcgccgaggtcccc
gaacgcagcatccttgtgggcgatcttaacatcgccccgcgtgaggatgacgtttgggac
cacaagaagctgctgaagatcgtcagccatacgccggtcgagattgccgcgctgggagag
gcgcaagaggctggtggttgggtcgatgtgacccgcgccgacatcccggaaggtaaactg
tattcgtggtggtcctaccgcgccaaggattgggacgccgccgacaagggacgccgcctc
gatcacctgtgggccacaccggatatcgccggggccgcgtatggcagccgggttcgacgt
gatgcccgtgggtgggaaaagccgtcggaccacgcaccggtctttgccaccttcgacctg
ccattggcttga
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