Palleronia sp. THAF1: FIU81_14935
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Entry
FIU81_14935 CDS
T06247
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maru03032
]
FIU81_14935
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_14935
Enzymes [BR:
maru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIU81_14935
DNA replication proteins [BR:
maru03032
]
Prokaryotic type
DNA Topoisomerases
FIU81_14935
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIU81_14935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QFU09972
UniProt:
A0A5P9JAN8
LinkDB
All DBs
Position
2908285..2909262
Genome browser
AA seq
325 aa
AA seq
DB search
MKRIPDLVYYPDNRPGIRRKRAGRGWSYIAPDGTRIDDTAERKRLNALAVPPAYEDVWIC
PRADGHLQATGRDERDRKQYRYHEDWTAYRAREKFSQLAEFGENLPRIRRRINADLKGEA
GDRALAIAAVLAMIDRLSMRVGNRDYAEENGAFGATTLRPRHVKLTEDALALDYRGKGGK
KITRKLRDKKLAKVLHQLDDLPGATLVSWTDDQGDTHEVTSSQVNELLADITGEDFTAKT
FRTWNGTVAALETAMREEKLTIKAMADAAAQCLGNTATIARNSYIHPAVIDLTEMPFADR
QALADAPEKRGLRIGERAALSLLSR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatccccgaccttgtgtactaccccgacaaccgccccggtatccgccgcaaa
cgggctggaagggggtggtcctacatcgcccccgacggcacccgcatcgacgacactgca
gagcgtaagcgattgaacgccctggccgtgccgcccgcctatgaagatgtctggatctgc
ccccgcgccgatggccacctgcaagccacgggccgagatgagcgggaccgcaagcaatac
cgctatcacgaggactggacggcttaccgcgcgcgcgaaaagttcagccagctggccgaa
ttcggcgaaaacctcccccgtatccgccgccgcatcaatgccgatctgaagggagaggca
ggcgaccgcgcgcttgccattgcagccgtgctggcgatgatcgaccgtctgtccatgcgc
gtgggcaaccgtgactacgccgaagagaacggcgcattcggggccacgaccctgcgcccg
cgccacgtcaagctgaccgaagacgctttggcgctggattaccggggcaagggcggcaag
aagatcacccgcaagctgcgcgacaagaagctggcgaaggtgctgcaccagttggacgac
ctgcccggtgccacgctggtgtcgtggacggacgaccaaggcgacacgcatgaagtcacc
tccagccaggtgaacgagcttctagccgacatcaccggcgaagactttaccgccaagacc
ttccgcacgtggaacggcacggtggctgcgctggaaaccgcgatgcgcgaggaaaaactg
acgatcaaggcgatggcagacgccgccgcgcagtgccttggcaacaccgccaccatcgcg
cgcaatagctacatccatcccgccgtgatcgacctgacagagatgccgttcgccgaccgc
caggccctcgcggacgcccccgaaaaacgcggtctgcgcattggggaacgggctgcgctt
tcgcttctgtcgcgctag
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