Palleronia sp. THAF1: FIU81_14970
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Entry
FIU81_14970 CDS
T06247
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FIU81_14970 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_14970 (xseB)
Enzymes [BR:
maru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FIU81_14970 (xseB)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FIU81_14970 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
ARM_TT21_5th
RL10P_insert
TMCO5
FH2
DUF3496
MTR4_beta-barrel
DUF1657
Motif
Other DBs
NCBI-ProteinID:
QFU09979
UniProt:
A0A5P9JDL7
LinkDB
All DBs
Position
complement(2915669..2915908)
Genome browser
AA seq
79 aa
AA seq
DB search
MSGDDIKKMSFEQAMKELEQVVGQLERGDVELEKSIELYERGAKLKERCAATLKAAEEKV
AKITAGADGKATGTEPLDP
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgatgatatcaagaagatgtccttcgagcaggcgatgaaagagcttgagcag
gtcgtcggccagctggagcgcggcgacgtcgagctggagaaatcgattgagctttacgag
cgcggcgccaagctgaaagagcgttgcgccgcgacgctgaaggccgccgaagagaaggtc
gccaagatcaccgctggcgccgacggcaaggccaccggcacagagcccttggatccgtga
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