Palleronia sp. THAF1: FIU81_15780
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Entry
FIU81_15780 CDS
T06247
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_15780 (addA)
Enzymes [BR:
maru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIU81_15780 (addA)
DNA repair and recombination proteins [BR:
maru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FIU81_15780 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QFU10139
LinkDB
All DBs
Position
3082494..3085799
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AA seq
1101 aa
AA seq
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MNDANARQITAAQPALSTWLSANAGSGKTRVLTNRVARLLLSDVDPTRILCLTYTKAAAS
EMQNRLFATLGRWAMMPDDSLRAELADLGESAAADLAKARRLFAKAIETPGGLRIQTIHS
FCAVLLRRFPLEAGVTPRFTEMDDRAAAQLRADCLEELAETQPDLMHALARQTGDINGIV
GEITGRRDAVRPATEADLRAALDLGPDITLDSVLAQVFDADTESVLTDLRAVLASGSKTD
MAAQAKLQSLRPPYATGTLAVLEDVMITGASAKAPFSAKIGSFPTKASRAALNEDTRTAL
DALMERVEAARATRLALATLDRSLTLHAFADAFLTLYAKAKEARGWLDFDDLILGARTLL
SRSEVAEWVLYRLDGGIDHILVDEAQDTAPAQWDVIEALSREFASGQGARDAHRTIFVVG
DKKQSIYSFQGADPEGFDRMHDHFAGQLGADALQRLELQHSFRSAPAILRAVDAVFADGL
GGDVQHIAFKDTMPGRVDLWPLTEGDPPTDPPDWQDPVDREDPESAIAKLSRQIAKTVRG
WLDAGETIPDGKGGQRKLGAGDILVLVRSRSGLFHPLIRACKAKGIEIAGADVLELESDL
AVRDLLSLLRFLALPDDDMSLAEALRSPLFGLSESDLYHLAQGRTGTLWKALRESDHDPA
RETIGDLLNNADFLRPYELLDRILLRHRGRERLLGRLGMESEDAIDALLAQALGYERTDI
PSLTGFLAWFDAETVKIKRQSDSAGGRLRVMTVHGAKGLEAPVVILADTTKVPRNDERKL
LAIPGGPTLWKPAKPELPPVLTPITDALDAAAAAERDRLLYVAMTRAESWLVVCGAELNT
LKNTWYEQIATGLEALDHEPLDVEPGTAKRFASGNWGGLEQRDGAVTDVEPAPLEGWFHE
MPPAPDVVAPLLTPSSLGRAKALSGEVDPDDDPDAALIRGTRIHLLLEHLPPDRPDDWPA
LARRLLGAEQLSDATQADLLAEAAGVLTNPTLAALLQKPALTEVDLTAPHPSGARIAGTV
DRLVITPDRITAIDYKSNRLIPDRQEDVPDGLLRQMGAYAHALAAIYPDRQIETALLWTR
APRLMPMDPDRVAAAFASALP
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccaacgcccgccagatcaccgccgctcaacccgcgctgtccacgtggctg
tcggcgaacgcgggttcgggcaagacgcgcgtattgaccaaccgcgtcgcccgccttttg
ctgtcggacgtggacccgacgcgcatcctgtgcctgacctatacgaaggccgccgcgtcc
gagatgcagaaccgcctgtttgccacattgggccgctgggcgatgatgccggacgacagc
ttgcgcgctgaactcgccgatctgggagagtccgccgccgcagatctggccaaggcgcgg
cgcctgttcgccaaggccatcgagactccgggtggcctgcgcatccagaccatccactct
ttttgcgccgttttgctgcgccgcttcccgctggaagcaggcgtcaccccgcgcttcacc
gaaatggacgaccgcgccgccgcgcagttgcgggccgattgcctggaagagttggccgaa
acgcagcctgatctgatgcatgcgctggcgcggcagacgggcgatatcaacggaatcgtg
ggagagatcaccgggcggcgcgacgcggtccgccccgcgacagaggcagacctgcgtgcc
gcgttggacctggggccagacatcacgttggacagcgttcttgcgcaggtgttcgatgcc
gacaccgaatccgtcctgaccgacctgcgcgccgtcctcgccagcggcagcaagacagac
atggccgcgcaggccaaactccagtcccttcgccctccctacgcgaccggcacgctggcg
gttctggaagacgtgatgattaccggagcgagcgcgaaagctcccttttcggccaagatc
gggagtttccccaccaaggccagccgcgcggcgctgaacgaggacacccgcaccgcgctc
gacgccctgatggagcgcgtcgaagccgcacgcgcgacgcgccttgcccttgctacgctg
gaccgcagcctgacgctgcacgctttcgcagacgccttcctgaccctctacgccaaggcg
aaagaggcgcgcggttggctggacttcgacgacctgatcttgggtgcgcgcaccttgctg
tcgagatccgaagtggccgaatgggtgctctatcgtctcgacgggggaatcgaccacatc
cttgtcgacgaagcgcaggacaccgcaccggcacagtgggacgtgatcgaggcgctgtcg
cgcgagttcgcgtccggtcaaggcgcgcgggacgctcatcgcacgatcttcgtggtcggc
gacaagaagcaatcgatctattccttccaaggcgcggaccccgaaggctttgaccggatg
cacgatcatttcgccgggcaacttggcgccgacgcgctgcaacggctggaattgcagcat
tcgttccgctctgcccccgccatcctgcgggccgtggatgccgttttcgccgacggactg
ggcggagatgtgcagcacatcgcgttcaaggatacgatgcccggccgcgttgatctgtgg
cccctgaccgaaggcgatccgcccaccgatccgcccgattggcaagacccggtggaccgc
gaagatcccgaaagcgccatagccaaactgtcgcgccagatcgccaagacggtgcgcggc
tggctggatgcgggcgagacgatccccgatggcaagggcggtcagcgcaagctgggtgcg
ggcgatatccttgtgctcgtccgctctcgctctggtctgttccacccgctgatccgggcc
tgcaaagcaaagggcatcgagatcgcaggtgccgatgtgctggagctggaaagcgatctg
gcggtgcgcgacctgctgtccctgctccgcttcttggctctgcccgatgacgacatgtcg
ctggctgaagccctgcgctcgcccctgttcggtctgtcagagagcgatctttatcacttg
gcccaaggtcgtactggcaccctgtggaaagccctgcgtgaaagcgatcacgatccagcg
cgcgagacgattggcgatttgctgaataacgcggatttcctgcgaccctacgagctgctc
gaccggatcctgctgcgccaccggggccgcgaacggctgcttgggcggttgggtatggag
tccgaggatgccatcgacgccctgctggcacaggcgctgggatatgagcgcacggatatc
ccttcgctgaccggctttctggcctggttcgacgccgaaaccgtcaagatcaaacgccag
tccgacagcgcgggcgggcggttgcgcgtgatgaccgtgcatggcgcgaagggtctggaa
gcgccagtggtgatccttgccgacaccaccaaggttccgcgcaacgatgagcgcaagcta
ttggcgatccccggtggaccgactttgtggaagcctgccaagccggagcttccgccggtt
ctgacaccgataaccgacgcgctggatgccgctgccgcagccgaacgtgaccgcctgctt
tatgtcgcgatgacccgcgcggaaagctggctggtggtgtgcggggcggagctgaacaca
ctgaagaacacctggtacgagcagatcgcaaccggtttggaagctctcgatcatgaacca
ttggacgtcgagcccggcaccgcaaaacgctttgccagtggcaactggggtggactggaa
caacgcgacggcgcagtgacagacgtggaaccggcgccgttggaaggctggtttcacgag
atgccgcccgcgcccgacgtcgtggccccattactgacgccctcgtctttgggtagagcc
aaggcactatccggcgaggtcgatcccgatgacgatcccgacgcggcgttgatccggggc
acgcgcattcacctgctgttagagcacctgcccccggatcgccctgacgattggccagca
ctcgctcgccgccttttaggtgccgaacaactaagcgatgcaacgcaggccgaccttttg
gccgaggcagcgggtgtgctgacgaacccaacgctcgccgccctgctgcaaaaacccgca
ctcacggaagtggacctgaccgcgccgcatccctctggcgcgcgcatcgccggaacggtg
gaccggcttgtgatcacaccggaccgtatcaccgcgatcgactacaaatcgaaccgcctg
atccctgatcgacaagaagatgtgcccgacggattgctgcgccagatgggtgcctatgcg
cacgcgctggccgcgatctatcccgacaggcagatcgaaaccgccctgctctggacccgc
gccccgcgcctgatgccgatggacccggaccgcgtagcagcagccttcgccagcgcgctg
ccttga
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