Palleronia sp. THAF1: FIU81_16250
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Entry
FIU81_16250 CDS
T06247
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maru03021
]
FIU81_16250
03009 Ribosome biogenesis [BR:
maru03009
]
FIU81_16250
Transcription machinery [BR:
maru03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FIU81_16250
Ribosome biogenesis [BR:
maru03009
]
Prokaryotic type
rRNA transcription factors
FIU81_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
KH_NusA_C
KH_1
S1
YlmH_RBD
RAD51D_N
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QFU10233
UniProt:
A0A5P9JD27
LinkDB
All DBs
Position
complement(3179770..3181380)
Genome browser
AA seq
536 aa
AA seq
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MAITSANQLELLQTAEAVAREKQIDPGLVVEAMEESLARAAKSRYGSEMDIRVSIDRKTG
RATFTRVRTVVEDEELENYQAEMTVETAKQYLDDPSVGDTLVEEVPPVEMGRIAAQSAKQ
VILQKVREAERDKQFEEFKDRIGTIINVAVKREEYGNIIVDLNPGEGVLRRNEKIGREAY
RPNDRIRVYIKDVRREPRGPQIFLSRTAPEFMAELFKMEVPEIYEGIIEIKAVARDPGSR
AKIGVISYDNSIDPVGACVGMRGSRVQAVVNELQGEKIDIIPWNEDLPTFLVNALQPAEV
SKVVLDEDAERIEVVVPEEQLSLAIGRRGQNVRLASQLTGLDIDIMTEEEESARRQAEFE
TRTKLFMDTLDLDEFFAQLLVSEGFTNLEEVAYVEIDELTVIDGVDDDTAGELQARARDI
IEAKNKAALDRARELGVEDSLVAFEGLTPQMIQALAEDGVKTLEDFATCADWELAGGWTT
ENGERKKDDGLLEPHGVDLEEAQAMVMTARIQLGWVDPADLEVDEDETVEEEEVQA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccatcacctctgccaaccagcttgagcttcttcagaccgccgaagcggtcgcccga
gagaagcagatcgaccccggccttgtggtcgaggccatggaagagagcctcgcccgcgcc
gccaagtcgcgctacgggtccgagatggacatccgcgtgtccatcgaccgcaagacgggc
cgcgcgaccttcacgcgcgtccgcaccgtggtcgaagacgaagagctggaaaactaccaa
gccgagatgacggtcgagacggccaaacagtatctagacgatccctccgtcggtgacacg
ctggtcgaggaagtgccccccgtggaaatgggtcgcatcgccgcgcaatccgccaagcag
gtcatcttgcagaaggtgcgcgaagccgagcgcgacaagcaattcgaagagtttaaggac
cgcatcgggacgatcatcaacgtcgcggtcaagcgcgaggaatatggcaacatcatcgtc
gacctgaaccccggcgagggcgtgctgcgccgcaacgagaagatcggtcgcgaggcgtat
cgccccaacgaccgcatccgcgtctacatcaaggatgtgcgccgcgagccgcgcggcccg
cagatcttcctgtcgcgcaccgcgcccgagttcatggccgagctgttcaagatggaagtg
cccgaaatctacgagggcatcatcgagatcaaggccgtcgcccgtgaccccggttcgcgc
gccaagatcggcgtgatttcctacgacaactccatcgatcccgtgggcgcctgcgtcggt
atgcgcggttcccgcgtgcaggccgtcgtgaacgagctgcaaggcgagaagatcgacatc
atcccgtggaacgaagacctgccgacgttcctggtgaacgcgcttcagcccgccgaagtc
agcaaggtcgttctggacgaagacgccgagcgcatcgaagtcgtggtgccggaagagcag
ctgtcgcttgccatcggccgtcgcggtcagaacgtgcgcctggccagccagctgacgggc
ctcgatatcgacatcatgaccgaagaagaggaatccgcgcgtcgtcaggccgagttcgag
acgcgcaccaagctgttcatggacacgctggatctggatgaattcttcgcgcagcttctg
gtgtccgaaggcttcaccaacctcgaagaagtcgcctatgtcgagatcgacgagctgacg
gtcatcgacggtgtggatgacgacacggccggcgagttgcaggcccgtgcccgcgacatc
atcgaggccaagaacaaggccgcgctggatcgcgcccgtgagttgggtgtcgaggatagc
ctggttgcattcgaggggcttactccccagatgatccaggcgttggcggaagatggcgtg
aagacgctggaagatttcgccacctgcgccgactgggaactggccggtggctggaccaca
gagaatggcgaacgcaagaaggatgacggcttgctagagccccacggcgtcgatctggaa
gaagcgcaggccatggtcatgaccgcgcgtatccagttgggctgggtcgatcccgccgat
ctggaagtcgatgaagacgaaaccgtcgaagaggaagaggtacaagcctga
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