Palleronia sp. THAF1: FIU81_16300
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Entry
FIU81_16300 CDS
T06247
Symbol
erfK3
Name
(GenBank) putative L,D-transpeptidase ErfK/SrfK precursor
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
maru
Palleronia sp. THAF1
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
maru01002
]
FIU81_16300 (erfK3)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
maru01011
]
FIU81_16300 (erfK3)
Peptidases and inhibitors [BR:
maru01002
]
Cysteine peptidases
Family C82
FIU81_16300 (erfK3)
Peptidoglycan biosynthesis and degradation proteins [BR:
maru01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FIU81_16300 (erfK3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
QFU10243
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All DBs
Position
complement(3188166..3188759)
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AA seq
197 aa
AA seq
DB search
MTDNKTRGVNRRFFLSGTAATVLAAPAIAQQNSTEYRAPVQGQTRRNASSFRTLDWRPYF
ENTTNGAILCDISSRALHYWNDDASVYKLYPTSVPQTDDLTRKGRTEVIRKVEGPSWAPT
PAMKERNPEWPDFIGPGPDNPLGTHALYLSWQFYRIHGTQDTRKIGRRSSNGCIGLYNEH
IQELYALTTTGTQVLLI
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataacaagacccgtggcgtcaatcgccgtttcttcctgtccggcaccgccgcg
accgttttggccgcgcccgcgatcgcgcagcagaactctaccgagtatcgcgcgcccgtt
cagggacagacgcgccgcaatgcgtccagcttccggacgttggactggcgtccgtatttc
gagaacacgaccaacggcgcgatcctgtgcgacatctccagccgggcgttgcactactgg
aacgacgatgcgtcggtctacaaactgtacccgaccagcgtgccccagaccgacgatctg
acccgcaagggccggacagaggtgattcgcaaggtcgaaggccccagctgggccccgacc
ccggcgatgaaagagcgcaatccggaatggcccgacttcatcggccccggcccggacaat
ccgcttggaacgcacgcattgtatctgtcgtggcagttctaccggattcacggcacgcag
gacacgcgaaagatcgggcgcaggtcctctaacggctgcatcggcctgtataacgagcac
atccaagagctttacgccctgacgacgacgggcactcaagtgttgctaatttaa
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