Microcaldota archaeon: ARM1_0082
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Entry
ARM1_0082 CDS
T10609
Name
(GenBank) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
marv Microcaldota archaeon
Pathway
marv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARM1_0082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marv03019
]
ARM1_0082
Messenger RNA biogenesis [BR:
marv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ARM1_0082
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
ARM1_0082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Nudix
Zn_ribbon_recom
zf-DNL
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
BCS90625
LinkDB
All DBs
Position
complement(91100..91660)
Genome browser
AA seq
186 aa
AA seq
DB search
MNNNIVFPGDSVELDNRSVDIEEFGIIENNKIKPYKEIRLYKSGDSILGKIIDDQISVLF
VKILPFTHSNIRYISNINGKIMVKDRGDLGMKLSDIILARIVKEDKDTFLLSLEGRSYGV
VLARCSECGSFLVASNRRLNSKEGKNKIERLICKECGNEEYRAVSQYYGKLDFIKKILIH
YSKGVD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaataataatattgtatttcctggagactctgtagagcttgataatagaagtgtagat
atagaagaatttggcattatagagaataataagataaagccctataaggagataaggctt
tataagagcggtgattcaatactaggaaagataatagatgatcagatctctgttctgttt
gtgaagatacttccattcactcatagcaatataagatatatatcgaatataaatggaaag
ataatggtaaaggatagaggagatcttggaatgaagctatctgatataatactagcaagg
atagttaaagaggataaagatacatttttacttagtctagaaggcagatcatatggtgta
gtattagcaagatgcagcgagtgtgggagctttctagtagcatcaaatagaagattaaat
agtaaagaaggcaagaataagatagaaagattaatatgtaaggaatgcggaaatgaggag
tatagggctgtaagtcagtattacggaaagttagattttataaagaagattctaattcac
tactctaaaggtgtagattaa
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