Candidatus Micrarchaeota archaeon ARM-1: ARM1_0189
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Entry
ARM1_0189 CDS
T10609
Name
(GenBank) exosome complex component Rrp42
KO
K12589
exosome complex component RRP42
Organism
marv Candidatus Micrarchaeota archaeon ARM-1
Pathway
marv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARM1_0189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marv03019
]
ARM1_0189
Messenger RNA biogenesis [BR:
marv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ARM1_0189
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
ARM1_0189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BCS90732
LinkDB
All DBs
Position
176726..177511
Genome browser
AA seq
261 aa
AA seq
DB search
MKDLADEYYIRKIESFVSENKRIDGRAQFDFREIKYKLDYIRNAEGSCYLELGNTKVIAG
IKIEAEEPLESSEEGNLITNVELLPLASSEYEAGPPTPEAIELSRVIDRAIRSAKIIDSS
NLLLEDNKVYSLYADIDVINFDGNIFDAGVMALLLALKNTRIPKYENGEIIRNEIVGKLN
IKGNVLSTTFVKINKTLLLDPNALEELAASTRLTIATDGDRIRAMQKGLSGSLTIREIEN
MIDISLEKYKDLSKIIDINKD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatctagcagatgagtattatataagaaagattgagagctttgtatctgagaat
aagaggattgatgggagagctcagttcgactttagagagatcaagtacaagttagactat
attagaaatgcagaaggatcttgctatctagagctgggcaacacaaaggttatagcaggc
ataaagatagaggctgaggagccattagagagctcagaagaaggaaatcttataacaaat
gttgagctattaccgttagcatcatctgagtacgaagctggaccaccaacaccagaggct
atagagctatctagagttattgatagagctataagatctgcaaagatcatagactcaagt
aatcttctactagaggataataaggtatatagcttatatgcagatatagatgtaataaac
tttgatggaaatatatttgatgcaggagttatggctttgcttctcgcattaaagaacaca
agaataccaaagtatgagaatggtgagattataagaaatgagattgttggaaagctaaat
ataaagggcaatgtattatctacaacattcgttaagatcaataagacattgctcttagat
cctaacgcgctagaggagcttgctgcatcaacaagattgacaattgcaacagatggtgat
aggataagagctatgcagaaaggcttaagtggatcattaacaataagggagatagagaat
atgatagatatctctttagaaaagtataaagatttatctaagataattgatattaataaa
gactag
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