Microcaldota archaeon: ARM1_0283
Help
Entry
ARM1_0283 CDS
T10609
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
marv Microcaldota archaeon
Brite
KEGG Orthology (KO) [BR:
marv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marv03016
]
ARM1_0283
Enzymes [BR:
marv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
ARM1_0283
Transfer RNA biogenesis [BR:
marv03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
ARM1_0283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
BCS90826
LinkDB
All DBs
Position
264127..265275
Genome browser
AA seq
382 aa
AA seq
DB search
MLKLELSGNSAYSLDLETFNELKEAFIGAVNKDRVYLKPEEIVYLMEVRGAKLYKDGREL
DIDHILRQYSDIKRFYARYATYKDWRERGLYALTSYSLDKTVGYNIKEYSKKAIELPSGV
IEVSFIKDDLISLCKINELSELLYNELWFGQYGNYKDSSSGMLVKYDIFETLYLIDKGII
KANYDKEAMYKSARRRHRFFDLMYNVYADWRDNGFVVKSGFKFGSNFRIYFPGIKPSDRS
DNKISHSKHVLHVFPENSKLLTSEWARAIRVAHSVKKSFILAIPQISKVKRIDIDFVLYH
RDRGFTMIPNRDKASYAIYSLAEDEYIDGKLLLSIIERAKEMNLNALISIADRESSVTYY
KLKEIRISDSNNRYFEIEWMQP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagctagagttgagcggtaacagcgcgtatagcttagacttagagacatttaat
gagctaaaggaagcctttataggagcagttaataaagatagagtgtatctgaagcctgaa
gagatagtatatctgatggaagttagaggtgcaaagctttataaggatggaagagagctc
gatatagatcatatactaaggcagtatagcgatattaaaagattctatgcaagatacgct
acatataaagactggagggagagaggcctttatgcactaacaagctactctctagataag
acagttggttataacatcaaagagtattcaaagaaggctatagagcttcctagtggggtt
atagaggtatcttttataaaagatgatcttatatcattatgcaagatcaatgagctctca
gagcttctgtacaatgagctgtggtttgggcagtatggcaactataaggatagcagctct
gggatgcttgtaaagtatgatatatttgagaccttatatctgattgataaaggtataatc
aaagcaaactatgataaagaagcaatgtataagtcagcaagaaggagacatagattcttt
gatcttatgtataatgtttatgcagattggagggataacggctttgttgtaaagtctggc
ttcaagtttggctctaactttagaatatactttccaggaataaagccatccgatagatca
gataataagatctcccactctaagcatgtattgcatgtatttccagagaacagcaagctt
ttgacatcagagtgggccagagctataagagtggcccattctgttaagaagagctttata
ctagctataccgcagatatcaaaggttaagaggatagatatagactttgtcttgtatcat
agagatagaggctttacaatgataccaaatagagataaggcatcttatgcgatatactca
cttgcagaggatgagtacattgatggtaagctattactatcaataatagagagagctaag
gagatgaatcttaatgcattaatctctatagcagatagagagtcatctgtaacttactat
aagcttaaagagattaggataagtgatagcaataatagatacttcgagatagaatggatg
cagccttaa
DBGET
integrated database retrieval system
