Microcaldota archaeon: ARM1_0423
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Entry
ARM1_0423 CDS
T10609
Name
(GenBank) putative tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
marv Microcaldota archaeon
Brite
KEGG Orthology (KO) [BR:
marv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
marv03016
]
ARM1_0423
Enzymes [BR:
marv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ARM1_0423
Transfer RNA biogenesis [BR:
marv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ARM1_0423
Prokaryotic type
ARM1_0423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
MurT_C
Motif
Other DBs
NCBI-ProteinID:
BCS90966
LinkDB
All DBs
Position
394753..395949
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AA seq
398 aa
AA seq
DB search
MLILKDKPEDFIVEEIALNGKILQIDTNISASDLGVSELDNGDYLVFVMQKRNWNTSQAL
RRIARYLSKGKKSFSFAGTKDRKAVTTQLCSIYKADIDKLKAMKIKDIKINGAFYYNKPV
KLGDLLGNRFRIILRGEHKPVSDQIEQYGRFPNFFGEQRFGFRDNNVKIGLELLRGNIKE
AVILYLTDTSNELNKLAIEARERLRREMDFKKALEYFPKYLKYERSVIEYLSRYENYANA
FRRLPRQLLLMFIHSVDSYIFNRELQLRIEQGISRMENDLYTKPDFYGFPSRELSKDYDE
SSFVMMPLIGYNTELNSIEKQILEELSIDKESFKVKHMPELNAKGSYRAAYAPYKNLYIK
DSKDIIEVGFEIPAGSYATTLLRYKGLEYKEVKELESN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcttatactaaaggacaagccagaggactttatagttgaagagatagcacttaatggt
aagatacttcagatagatactaatatatccgcaagcgatctcggagtatcagaattagac
aatggcgattatctagtatttgtaatgcagaagcgtaattggaatactagtcaagctcta
agaagaatagctagatatctatcaaaagggaagaagtcattctcatttgctggaacaaaa
gacaggaaggcagtaacaactcagctatgcagtatatataaagcagatatagataagcta
aaagcaatgaagataaaggatataaagataaacggcgctttctattataataagccagtt
aagctaggagatcttctaggaaataggtttagaataattctaagaggtgaacataagcca
gtaagtgatcagatcgagcagtatggaagatttcctaacttcttcggtgagcaaagattc
ggatttagagataataacgtgaagataggtttagagctccttagaggtaatataaaggag
gcagttatcttatatcttacagatacatcaaatgagctaaataagctagcgatagaggct
agggagcgcttaagaagagagatggactttaagaaagctttagagtactttcctaagtat
ctaaagtatgagagatcagttatagagtatctttcaagatatgagaactatgcaaatgca
tttagaaggttaccaagacagcttcttcttatgtttatacattctgtagactcatacata
tttaacagagagctacagctaagaatagagcagggcataagtagaatggagaatgatcta
tatactaagccagacttctacggatttccaagcagagagctatctaaagattatgatgaa
agtagctttgtaatgatgccactgataggatataatacagagttaaatagtatagagaag
cagatactagaggagctctctatagataaagagtcgtttaaggtaaagcatatgcctgag
cttaatgcaaaaggcagctatagagcagcatacgcaccatacaagaacctatatataaaa
gatagtaaggatattatagaagtgggctttgagatacctgcaggatcttatgcaacgacg
ctgctaagatacaaaggcttagagtacaaagaggtaaaagagctagagtctaactag
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