Minisyncoccus archaeiphilus: MNSC_06320
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Entry
MNSC_06320 CDS
T10788
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
marw Minisyncoccus archaeiphilus
Pathway
marw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNSC_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marw03019
]
MNSC_06320
Enzymes [BR:
marw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MNSC_06320
Messenger RNA biogenesis [BR:
marw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MNSC_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
PhoH
AEP-TOTE
Cas3-like_C_2
Utp25_C
Shikimate_DH
ATP12
Motif
Other DBs
NCBI-ProteinID:
BFT94624
LinkDB
All DBs
Position
complement(752342..753688)
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AA seq
448 aa
AA seq
DB search
MKTQLKSSYQKRYLKKPGNNFGSKKPGFSDTRKTKEVFGSGNISSKGGSGEGRYRDNKRP
SYNNGPRTGRGNNFSKSKKSFREEKIDINRFIQKCSTVTKEEEYVPVNCFNDFQVDNKLK
ANIAKKGYINPTPIQDKTIPSALEGKDIVGIANTGTGKTAAFLIPAIDKCIKNKSKTIII
VPTRELALQIETEFKALTHGLRIFSVLCIGGTSVGKQIFSLKRNHDFIIGTPGRIKDMAQ
RKHIKLSAFNTIVLDEVDRMLDMGFVDDISHLISQLPIERQNLFFSATLPVKMEGLVNKF
IKDPVKITAKKQESSPNVNQTIVRIGNGKKYDILCDLLNKDELEKVIIFAKTKVGVEKLS
EQLKKNGFNSDSIHGDKRQSKREKALGRFRASQIKILVTTDVAARGLDINDITHVINYDI
PATYDDYVHKIGRTGRGNRRGEAITFVS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaacttaaaagcagctatcaaaaaagatacctgaaaaaaccaggtaataat
ttcggttcaaagaagccaggattttctgacacaagaaaaactaaagaagtatttggttca
ggaaatattagttccaaaggtggatcaggagaaggaagatacagagataataaaaggcct
agttacaacaatggaccaagaactggtagaggaaataatttctctaagtcaaagaaatct
ttccgcgaggagaagattgacattaataggtttattcaaaaatgttctactgtcactaaa
gaggaagagtatgtgccagtaaattgttttaatgattttcaggtagataataaactaaag
gcaaatattgccaaaaagggttatattaaccctactcctatacaggacaaaactatccct
tctgcattagaaggaaaagatatagtaggaattgctaatactggaactggaaagactgca
gcctttttaattcctgctattgataagtgtattaagaataagtcaaaaactataattatc
gtcccaacaagagaattagccctacagattgaaacagagtttaaggctcttactcatgga
ttaagaatattctctgtactatgtatcggagggactagtgtcggtaaacagatattctcc
ttaaagaggaatcatgattttattatcggaactcctggaagaataaaggatatggcacaa
agaaagcacattaagttaagtgcatttaatactattgtgcttgatgaagtagatagaatg
ttagatatgggatttgttgatgatattagtcatttaatcagtcaactaccaatagaaagg
cagaatcttttcttctcagcaaccttgccagtgaaaatggaaggactagtgaataagttc
attaaggatccagttaagataactgctaaaaagcaggaatcatctcctaatgttaatcag
accatagtaaggattggaaatggtaagaagtatgatatcttatgcgatttattgaacaag
gatgaattagagaaagtgataatctttgctaaaactaaagtaggagttgaaaagctatca
gaacaattaaaaaagaatggatttaattctgattccatacatggagataagagacagtca
aagagagaaaaagctttgggtagattcagggctagtcagataaaaatattggtaactacc
gacgtcgctgcgagggggttggatatcaatgatattactcatgtaattaattatgacatt
ccagctacttatgatgattatgtacataagattggaaggactggtagaggaaatagacga
ggagaggctattacattcgttagttaa
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