Minisyncoccus archaeiphilus: MNSC_10830
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Entry
MNSC_10830 CDS
T10788
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
marw Minisyncoccus archaeiphilus
Pathway
marw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MNSC_10830 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marw03021
]
MNSC_10830 (rpoC)
03400 DNA repair and recombination proteins [BR:
marw03400
]
MNSC_10830 (rpoC)
Enzymes [BR:
marw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MNSC_10830 (rpoC)
Transcription machinery [BR:
marw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MNSC_10830 (rpoC)
DNA repair and recombination proteins [BR:
marw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MNSC_10830 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BFT95075
LinkDB
All DBs
Position
complement(1225044..1228649)
Genome browser
AA seq
1201 aa
AA seq
DB search
MFVSNLESIKIKLASPEEILSWSYGEVVKPETINYRTQRPEKDGLFCEKIFGPTKDYECF
CGKYKRIRYKGIICDRCGVEVTKSSVRRERMGHIKLASPVSHIWFLKGMPSRIGMVLGLP
IHKVEEVVYFVSYIITKVDEDEKNNILESIEDEYKSKTKEYKKEIEKTDLPEKAKEKKLE
ESLADLKDARDKAKKEVSEIKPMQILTEMDFHRLSLKYGEVFEAGTGAEVIRELFKNLTL
EDEVKKIEVQLEGKKSTEDKRVILRRLKLFKEMIQSGVRPEWMFIEVLPVLPPDLRPMVQ
LDGGRYASSDLNDLYRRVINRNNRLKYLLEIGAPEVIVRNEKRMLQEAVDALIDNKMRKG
TTTQASTGGRRLLKSLADMLAGKQGRFRQNLLGKRVDYSGRSVIVVGANLNLDQCGIPKK
MALELFKPFVIKKLLERELAYNVRGATRLIEDEIDEVWAALEEVVKHKVVLLNRAPTLHR
LGVQGFYPVLIEGDAIRLHPLVCTAFNADFDGDQMAIHLPLSEEAQKEARERMLSSMNLL
RPSTGDPIAIPTKDMVLGCYYLTKVAPGAEGEGKIFGSPEEAKIAHDLKKVNLRALVKVR
FGDEFVDTTVGRIIFNEELPEGFEYQNDVMDSKNVKKTINKIVDIYGSKAAITLDKIKDL
GFRYATLSGITWGMGDLTIPAEKKGMIAEAEKKIKVVEDYYEKGLLSKDEKINQVIEIWK
KVKTEIEKLVPKAIDGKSPVFSIVDSGSRGSWSQPVQMAGMKGLVANPSGRIIELAIKNC
FKEGFDVLEYFISTHGARKGTADTALRTSTSGYLTRRLVDVAHDVMINDEDCGDDQGMVM
YRKDSEEINQDFIHKLFGRVSLEDIKDPETKEMIVSKGEYISLKAAQRIKELNIPEMIVR
SPLSCKCIRGVCKKCYGLDLGWKKEIDLGEAVGVIAAQVIGEPGTQLTMRTFHTGGVAGE
ADITRGLPRVEEVFERRTPKGEAEMCTKDGKVVDVSEKAGKILVLPIKKGKEAEKEEMME
YEVPLNIEILVKKDEVIKKGQPLCAGSLDLRKLYKLMGEAVTRDYIIKEIQKVYVSQGVA
IHDKHIEIIVKQMFSRVKIKSSGDSFFSEDEIISKARMLEENERLEKEGQRPIEGEVVIL
GISKVALNTDSFLSAASFQETSRILIESSLRGEEDKLRGLKENVILGKLVPIGTGYTKDK
K
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttctaatcttgaatcaataaaaatcaaattggcttcaccagaagagatattg
agctggtcctatggagaagtggtaaagccagaaacgataaattacaggacacagaggcca
gagaaagacgggttattctgtgagaagatttttggacctacaaaggactatgaatgtttt
tgtgggaagtataagaggataaggtataaagggataatctgtgaccgttgtggggttgag
gtgactaaatcatctgttaggagagagaggatggggcatattaagctcgcaagtcctgtt
tctcatatttggttcttgaagggcatgccttcaagaattggtatggttttaggtttaccg
atacataaagtagaagaggtggtgtatttcgtctcatatatcattactaaggtagatgaa
gatgagaagaataatattcttgagagtattgaggatgagtacaaatcaaagactaaggag
tataagaaggagattgagaagactgatttgccagaaaaagctaaagagaagaagttagaa
gagtctttggctgacttaaaggatgctagagataaggctaagaaagaggtgtcggaaatt
aagccgatgcagattttaactgagatggattttcatagactatcacttaaatatggtgaa
gtctttgaagctggtacaggagctgaggtgattagggagttatttaagaatttaacctta
gaggatgaggttaagaagattgaagtacagttagaggggaagaagtctactgaggataag
agggtgattttaagaaggcttaagttgttcaaggagatgattcagtcaggtgttagacct
gaatggatgtttatcgaggtattaccagtcttaccacctgatttgaggccaatggtccaa
ttagatggaggaaggtatgcttcttctgatttgaatgatttatataggagagtgattaat
aggaataatcgtttgaagtatttactggaaattggagcacctgaggttattgttaggaac
gagaagaggatgttacaggaagctgtggatgctttgattgataacaagatgagaaagggt
actactactcaagctagtaccggaggaaggaggcttcttaagagtttggctgatatgctt
gccggaaaacagggtaggtttaggcagaacttgcttggaaaaagagtagactattcgggt
agaagtgttattgtggtaggagcaaatttaaatcttgatcagtgtggtattccaaagaag
atggctttggagttatttaaaccattcgtgattaagaaactactcgagagggagttggca
tataacgtgagaggggcaactcgtttaattgaggatgagattgatgaagtatgggctgct
ttagaagaagtggtaaagcataaggttgttctgttgaatagggcaccaacattgcatcgt
ttaggagtacaagggttttatcctgtattaattgagggagatgcaattaggctacatcca
ttagtatgtactgcttttaatgctgattttgatggagatcaaatggctattcatttacct
ttatcagaagaagctcaaaaagaagctagggagaggatgttgtcttcgatgaatttatta
agaccttctactggggatccaattgctattccaactaaagatatggttttgggatgttat
tacttgaccaaggttgctcctggcgctgagggtgaaggaaagatatttggttcaccagaa
gaagcaaagattgctcatgacttgaagaaggtaaaccttagagctttagtgaaagttagg
tttggtgacgaatttgttgatactacagttggtagaattatctttaatgaggagttacct
gaggggtttgaatatcagaatgatgtgatggattctaagaatgttaagaagacaattaat
aagattgtggacatttatggtagcaaggcagcaataactttggataagattaaggattta
ggatttaggtatgctactttgtctggtattacttggggaatgggtgatttaactattcct
gctgagaagaagggtatgattgcagaagcagagaagaagatcaaggtggtggaagattat
tatgagaaggggttactgtctaaggatgagaagattaatcaggtgattgagatatggaag
aaagtgaagactgagattgaaaaattagttcctaaggctattgatggaaagagtccagta
ttctcgattgttgattctggttcaaggggttcatggtctcagccagtacagatggctgga
atgaaaggtcttgtggcaaatccatctggtaggattattgaacttgctattaagaactgc
tttaaggaaggatttgatgtgttagagtatttcatttcaactcatggtgctagaaaaggt
actgctgatactgcgcttagaacatctacttccggttatcttacaagaaggttggtagat
gttgctcatgatgttatgattaatgatgaggattgcggagatgaccagggaatggtaatg
tatagaaaagactcagaggaaattaatcaagacttcattcacaagttatttggaagagtg
tcattagaggatattaaagatccagaaactaaggaaatgattgttagtaagggtgagtat
atatctttgaaggctgctcagagaattaaggaacttaatattcctgagatgatagtaagg
tctcctctatcatgtaaatgtattagaggggtttgtaaaaagtgttatggacttgacctt
ggatggaagaaagaaattgatttaggtgaagctgttggagtaatcgctgcacaggtcatt
ggtgagcctggaacacagttaaccatgagaactttccatactggaggtgtggcaggtgaa
gcagatattactcgaggtcttccgagggttgaagaggtgtttgagaggaggactccaaaa
ggagaggctgagatgtgtactaaagatggaaaggtagttgatgttagtgaaaaagctgga
aagatattagtcttacccattaagaaaggaaaggaggcggaaaaggaggaaatgatggag
tatgaggttccattgaatattgagatattagtgaagaaggatgaggttattaagaaagga
caaccactatgtgctggttcactggatcttaggaagctgtataaattaatgggtgaagca
gtgactagagactatattattaaggaaattcagaaggtatatgtctctcagggggtagct
attcatgataagcatatcgaaatcattgttaagcaaatgttttcaagggtgaagattaag
agttctggagatagtttctttagcgaagatgagattatttctaaagcaaggatgctcgaa
gagaatgagagactagaaaaggaggggcagcgtccgattgaaggagaggtagttatatta
ggtatttctaaggtagcattgaatacagatagtttcttatcagctgcatcattccaagag
acatcaagaatattgattgaatcatctcttagaggagaagaagataagttaaggggattg
aaggagaatgtgattctaggaaagttagttccaataggaacaggttatacaaaggataaa
aaataa
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