Minisyncoccus archaeiphilus: MNSC_12540
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Entry
MNSC_12540 CDS
T10788
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
marw Minisyncoccus archaeiphilus
Pathway
marw03410
Base excision repair
marw03430
Mismatch repair
marw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MNSC_12540
03430 Mismatch repair
MNSC_12540
03440 Homologous recombination
MNSC_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
marw03400
]
MNSC_12540
DNA repair and recombination proteins [BR:
marw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MNSC_12540
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MNSC_12540
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MNSC_12540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
BRE
Motif
Other DBs
NCBI-ProteinID:
BFT95246
LinkDB
All DBs
Position
complement(1458864..1460057)
Genome browser
AA seq
397 aa
AA seq
DB search
MKLKNIEKVVKRIEEAITKEEQIILFGDSDMDGVSATVIAKEAISNKAFIMHKKVKMVAY
FPDRKKEGYGLNEIVLDYIIDKYPEKGIIITLDCGITNFEEIKKARKEGFYVMVIDHHQP
VIDGLPEADIIVDPKQKGDDYPFKDFSNAGLSFKLAEELLGDKMPSLLKDSLLELTAMAT
IADMMPEREENIDYIYQGLSKIENSQRPILKAFFAILNPQEFTSKRDMIYKINSCFNVAN
IDSNHVSLLYYVLTENDLEKSKDYARELLEEASRRQSEIHALMDDAKRIIDSRLGGKIIF
EGSPNWSIEYLGAVASRLTLLYNKPVFIYERYEDFSRGTVRLPKKYDAVKAMESCKELLR
TFGGHPPAAGFTVLNENLEKFKAALIDYFNKVDSGCE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaagaatatagaaaaggtagtgaagagaatagaagaggcaataacgaaggag
gaacagattattttgttcggagattctgacatggatggagtgtctgctactgtaattgca
aaggaggcgataagtaataaggcatttattatgcataagaaagttaagatggttgcttat
tttcctgatagaaagaaggagggttatggattgaatgagattgtgctcgattatattatt
gataaataccctgaaaaggggataatcattactttagattgtggtataactaatttcgaa
gagattaagaaagcgagaaaggaaggtttttatgtgatggtaatagatcatcatcaacct
gtgatagatgggttgcctgaagcagatattatcgttgatcctaagcagaaaggagatgat
tatcctttcaaggatttttctaatgcgggactttcttttaaattagcagaagagctttta
ggcgataagatgccatcgttgttgaaggatagtttattagagttaactgcaatggctacg
atagcggatatgatgcctgagagggaagagaatatcgattatatttatcaaggattatca
aagatagaaaatagtcagagaccgatactaaaagctttcttcgccatattgaatcctcag
gagtttacctctaaaagagatatgatatacaagataaatagctgtttcaatgtggctaat
atagatagtaatcatgtttccttattgtattatgtgttgactgaaaatgatctcgagaag
tctaaagattacgcaagggagttattggaagaggcaagtagaaggcagtcagagatacat
gctttgatggatgatgctaagaggataattgactctaggctgggaggtaagataatattt
gaaggttctcctaattggagtatagagtatttaggggcagtggcttcaagattgacattg
ctatataataagccggtatttatatatgagaggtatgaagattttagcagggggacagta
aggcttccgaagaagtatgatgctgttaaggcaatggaaagttgcaaggaattgttgcgc
acgtttggaggtcatcctccagcagctgggtttacagtactgaatgagaatctggagaag
ttcaaagcggctttgatagattatttcaacaaggtggatagtgggtgtgaataa
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