Marixanthomonas sp. SCSIO 43207: INR76_01490
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Entry
INR76_01490 CDS
T07485
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
marx
Marixanthomonas sp. SCSIO 43207
Pathway
marx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INR76_01490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marx03019
]
INR76_01490
03016 Transfer RNA biogenesis [BR:
marx03016
]
INR76_01490
Enzymes [BR:
marx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
INR76_01490
Messenger RNA biogenesis [BR:
marx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
INR76_01490
Transfer RNA biogenesis [BR:
marx03016
]
Prokaryotic type
tRNA degradation factors
INR76_01490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
UAB81460
LinkDB
All DBs
Position
312155..314368
Genome browser
AA seq
737 aa
AA seq
DB search
MIPKVFKEVIDLGDGREISIETGKLAKQAHGSVVVKSGNCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDDDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFIINPTRSQLEESDIDMMI
GASADSVMMVEGEMKEISEEEMVEAIKFAHEHIKKQCEAQLKLAEAFGKKETREYEPERE
DADLEKKIKDMAYDKVYAIAKGGSAKQERGAAFAEIKEEIIASFTEEELEDFGDLVSKYY
SKAEKAAVRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSAVFTRGETQALATVTLG
TSREANQIDMPSFEGEETFYLHYNFPPFSTGEARPIRGTSRREIGHGNLAQRALKGMIPE
DCPYTVRVVSEILESNGSSSMATVCSGTMALMDAGVKLKKPVSGIAMGLISDAESGNFAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVKALKQAADGRLHILEKL
TDTISAPNADVKSHAPKMVTVRIDNEYIGALIGPGGKVIQELQKETGTTIVINEDPETEE
GVVEILGTDQNGIDAVLAKIDALTFKPEVGSVYEVKVIKILDFGAVVEYVEAPGNEVLLH
ISELAWERTDNVTDVVNMGDVIDVKYFGFDSRTKKEKVSRKALLQKPEGYKDRKGGGNRD
NQNKGRDNRNRDNKRRD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaaagtatttaaagaggttatagaccttggcgacggtagagaaatttctatc
gagaccggaaaattagcaaaacaggcacacggttctgttgttgtaaaatctggtaattgt
atgttattatgtactgtagtttcaaactacaaacaaagtgatgtagactttttaccatta
acagtagattatcgtgaaaagtttgccgctgcaggtcgctatccaggtggtttctttaaa
agagaagcaagacctagtgatggtgaagttttaacaatgcgtctagtagatcgcgtacta
cgcccactattcccaaaagattatcacgccgaaacacaagtgatgattcaattaatgtct
cacgacgatgatgtaatgccagatgcaatggcaggtttagccgcttcagcagctattcaa
ctttcagatttcccttttgaatgtgccatttcagaagctcgtgtaggtcgtgtaaacgga
gagtttatcattaacccaactaggtcacaacttgaagagtctgatattgatatgatgatt
ggcgcatctgcagattctgtgatgatggttgaaggtgaaatgaaagaaattagtgaagaa
gaaatggttgaggccattaaatttgctcacgaacacataaaaaaacaatgcgaagcacag
cttaaacttgctgaagcatttggaaaaaaagaaactcgtgagtatgagcctgaacgtgaa
gatgcagacttagaaaagaaaatcaaagatatggcgtatgataaagtatacgctattgca
aaaggaggttcagcaaaacaagagcgtggagcagccttcgccgaaattaaagaagaaatt
atagcttcttttactgaagaagaacttgaagattttggtgatttggtttcaaaatactat
agcaaagccgaaaaagccgcagtaagagacctaacacttaacgaaggtttacgtcttgat
ggaagaaaaacagacgagataagacctatatggtgtgaagtagactacttaccttctaca
cacggttctgcagtatttacaagaggagaaacgcaagccttggcaacagtaacacttggt
acttcaagagaagcaaaccaaatagatatgcctagctttgagggtgaagagacattctat
ttacactacaacttcccccctttctctaccggagaagctcgcccaattagaggtacctct
cgcagagaaataggtcacggtaacttagcacaacgtgctttaaaaggaatgattcctgaa
gattgtccttataccgttcgtgttgtttcagaaatattagaatctaacggttcttcatct
atggcaaccgtttgtagtggtacaatggcattaatggatgccggtgtaaaacttaaaaaa
ccagtttcaggtattgcaatgggattaattagtgatgccgaatcaggaaattttgccgta
ttaagtgatatcctaggtgatgaagatcacttaggcgatatggattttaaagttacaggt
actgcagatggtattactgcttgtcaaatggatataaaagttaaaggactttcatatgaa
attttggtaaaagctttaaaacaagctgcagacggaaggttgcatattcttgagaaatta
actgacactatttctgcacccaatgcagatgtaaaatcacacgccccaaaaatggttact
gtgagaattgacaatgaatacattggtgcattgattggcccaggaggaaaagtaattcaa
gaacttcaaaaagagacaggaactaccattgtaattaatgaagaccctgaaactgaagaa
ggagttgttgaaatccttggtacagatcaaaatggaattgacgctgtattggcaaaaata
gacgcacttacttttaaacctgaagtaggaagtgtatatgaagtaaaagtgataaaaatt
cttgattttggagccgttgtagaatatgttgaagctcctggaaatgaagttttattacac
atttctgaactggcttgggaacgtacagacaatgttaccgatgttgtaaacatgggtgat
gtgattgatgtaaaatatttcgggtttgattctagaactaaaaaagaaaaagtatctaga
aaagctttgcttcaaaaacctgaaggttataaagacagaaaaggtggcggaaatcgagac
aatcaaaataaaggtcgagataatcgcaatcgtgacaataaaagaagagactaa
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