Marixanthomonas sp. SCSIO 43207: INR76_05310
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Entry
INR76_05310 CDS
T07485
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
marx
Marixanthomonas sp. SCSIO 43207
Pathway
marx03030
DNA replication
marx03430
Mismatch repair
marx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
marx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
INR76_05310 (dnaE)
03430 Mismatch repair
INR76_05310 (dnaE)
03440 Homologous recombination
INR76_05310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marx03032
]
INR76_05310 (dnaE)
03400 DNA repair and recombination proteins [BR:
marx03400
]
INR76_05310 (dnaE)
Enzymes [BR:
marx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
INR76_05310 (dnaE)
DNA replication proteins [BR:
marx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
INR76_05310 (dnaE)
DNA repair and recombination proteins [BR:
marx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
INR76_05310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
UAB82178
LinkDB
All DBs
Position
1140566..1144918
Genome browser
AA seq
1450 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPVTDTDNWPRCIQIAWQLHDEMGNVIEHQDYLVQPDGFTIPF
DAEKIHGISTELAQKEGVSLAEVAEKFAKALSKTKFVVGQNVGFDLNIMGAEFHRLEMHN
PLPQLPVLDTCTETTAQLCQIPGGRGGKFKLPTLTELHEFLFNEPFAEAHNATADVEATT
RCFLELVRRNIYTAKELDVQPDYFEKFSEENPKEIELIGLKHINLKKASEKIRKEIEAQT
QTETISSEEIKENIATLEETAFSHLHNHSQFSILQSTSSTQDLVQAAIENEMPAVALTDT
GNMMGAFHFTKAVNAYNSGLSEEEKHKELKAIVGCEFFVCEDHLNKNHKDNGYQVVLLAK
NKKGYHNLAKMASIAYTDGFYYVPRIDKNVIKKYKENIIALTGSLYGEVPGKILNVGEHQ
AEEALIWWKEQFGEDLYVEIMRHNQEDEKRVNTVLVELAKKHEVKLVACNNTYYIHKEDA
NAHDILLCVKDGEKQATPIGRGRGYRYGLPNDQYYFKSQEEMKSLFKDLPEAISNISEVV
NKIESYTLARDVLLPKFSIPETFQDPRDAEDGGNRGENAYLKHLTFKGAEKRYEEITPEI
EERLNFELSVIENTGYPGYFLITEDFIREARNMGVSVGPGRGSAAGSAVAYCLGITNIDP
IKYDLLFERFLNPDRVSMPDIDIDFDDEGRSKVMDYVIEKYGANQVAQIITYGTMAAKSS
IRDTARVLDLPLNDADRIAKLIPNMTKLNKIFGLSEQELRSKFRSDELPKVNELLNLSEG
EDLEAETINQAKILEGSVRNTGIHACGVIITPDDITNFVPVSVAKDSDLYVTQFDNSVVE
SAGLLKMDFLGLKTLTLIKDTVKIVKHKHNIDLDPDSFPLDDEETYKLFQRGETVGIFQY
ESAGMQKYMKELKPTVFADLIAMNALYRPGPLEYIPSFIRRKNGEEDIEYDLPAMEEYLQ
ETYGITVYQEQVMLLSQKLADFSKGDADVLRKAMGKKQKAVLDKMKPRFIDNASKKGHDP
EKLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNMNDIKQVT
FFMEECKRMGLTVLGPDVNESFYKFTVNDQGAIRFGMGAVKGVGGNAVATIVENRKDGNY
KSIFDLAKRIDLRAANKKAFESLALAGGFDSFDTHRAQYLHDEGDGVMFVEKVLKYASKF
QETQNSSQVSLFGEASDVQIPEPEVPPCEEWGTMKKLKLEKDVVGVYISGHPLDDFKLEI
KYFTNCKVSDFNNLEKFVNRELSFGGVISDVQHRESKSGRGWAIFTVEDYDDSYEFKIFG
EEYLKFRHFLVPNSFIHARVYIKEGWTNRDTGKKGDPRIQYSTMLQLHDVMEKHSKKLTI
RMPVQDLENDRIDRLKDLFTIHKGEKQLHFLIYEMTDKVKLNMPSRTKKIEINKELLNEL
QAEQINFKLN
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttatttttgacaccgaaactaccggcttaccaaaacgctgggacgccccagta
accgatacagataactggccaagatgtattcaaatagcttggcagctgcacgatgaaatg
ggtaacgttattgagcatcaagattatttggtgcaacccgatgggtttaccattcctttt
gatgctgaaaaaatacacggtatctctacagaattagcacaaaaagaaggagtttctcta
gctgaagtagccgaaaaatttgccaaagcgttatctaaaacaaaatttgttgttggtcaa
aatgttggtttcgacttaaatattatgggagccgagtttcaccgtttagaaatgcacaat
ccactgccacagttaccggtgttggatacctgtaccgaaaccacggctcaactatgtcaa
attcctggtggacgaggcggtaaatttaaattacctacgttaaccgagttacacgaattt
ttgttcaacgagccatttgctgaagcacacaacgcaacagccgatgtagaagcaactacg
cgttgttttctagaacttgtaagaagaaatatttataccgctaaagagctcgatgttcaa
ccggattatttcgaaaaattttcagaagagaacccaaaagagattgaattaattggcctt
aaacatatcaatcttaaaaaagcttcagaaaaaataagaaaagaaattgaggctcaaact
caaaccgaaactatttcttctgaagagattaaagaaaacattgcgacacttgaagaaacg
gcattttcccaccttcataatcattcgcagttttctattttacaatctacctcgtctaca
caagatctagtgcaagcagcaattgaaaacgaaatgcccgcagttgctcttaccgatacc
ggtaatatgatgggtgcttttcattttacaaaagccgtaaatgcctataattcaggtctt
tcagaagaagaaaaacataaagagttaaaagcaattgtaggttgtgagttttttgtttgt
gaagaccatcttaacaaaaaccataaagataatggatatcaagttgtgttgcttgcaaaa
aataaaaaagggtatcacaatcttgccaaaatggcttccattgcttacacagatggtttt
tattatgtgcctaggattgataaaaatgttataaaaaaatacaaagaaaatattatagcc
cttaccggaagtttatacggtgaagttccggggaaaatattaaatgtaggtgaacatcaa
gctgaggaagcgctaatctggtggaaagaacaatttggtgaagacctatatgttgaaatc
atgcgtcataatcaagaagatgaaaaacgtgtaaatactgtccttgtagagcttgctaaa
aaacacgaagtaaaactagtagcatgtaataacacctattatattcataaagaagatgcg
aatgctcacgatattttgttatgtgtaaaagatggtgaaaaacaagcaacccctataggt
cgtggtcgtggataccgttatggattacccaatgatcaatattattttaaatcacaagag
gagatgaaaagcctctttaaagatttacctgaagcgattagcaacatttcagaagtggta
aataaaattgaatcatatacattggctagggatgtattgctcccaaaatttagcattccc
gaaacatttcaagatcctagagatgctgaagatggcggaaatagaggtgaaaacgcttac
ctaaagcatttaactttcaaaggtgcagaaaaacgctacgaagagattacacccgaaatt
gaagaacgcctcaattttgagttgagcgttattgaaaacacagggtatccgggttacttt
ttaattaccgaagattttattcgcgaagctagaaatatgggagtctctgttggtcccggt
cgtggttcggcagcaggaagtgccgtggcatattgtttaggaattaccaacatagatcca
ataaaatatgacttactttttgagcggtttttaaatcctgaccgtgtaagtatgccagat
attgatattgattttgatgatgaaggtcgaagcaaagtaatggattatgttattgaaaaa
tatggagccaatcaagtagctcaaatcatcacctacggaaccatggctgcaaaatcatct
attcgagatactgctcgcgtgcttgatttgcctcttaatgatgcagataggattgcgaag
ttaattccgaatatgaccaaattgaataaaatttttggcttatcagagcaggaattgcgt
agtaaatttagaagtgatgagctacctaaggttaatgagttgttgaatctttcagaagga
gaagatttagaagccgaaaccattaatcaagcaaaaatattagaaggttcggttagaaat
accggtattcacgcttgtggagtgattattacaccagatgatattaccaattttgtacct
gtttctgtagcaaaagattcagatttatatgtgacgcaatttgacaactctgttgtagaa
agtgccggtttgttgaagatggatttcttagggctaaaaacgttgacacttatcaaagat
acggtcaaaattgtaaaacataaacacaatattgatcttgatccggatagttttccgcta
gatgatgaagaaacctataaactattccagcgtggtgaaactgttggaatatttcagtat
gaatctgcagggatgcagaaatatatgaaagagctgaaaccaactgtctttgcagattta
attgcaatgaacgctttgtatcgtccaggacctttggagtatattcccagttttattaga
agaaaaaatggagaagaagatatagaatatgatcttccggcaatggaagaatacctacaa
gaaacctacggaattaccgtctaccaagagcaggtaatgttgttgtcacaaaagctagca
gatttcagtaaaggtgatgccgatgtgctacgaaaagctatgggtaaaaagcaaaaagcg
gtgctagataaaatgaaaccacgctttattgacaacgcttcaaaaaaaggtcatgatcct
gaaaagttagaaaaaatttggaaagattgggaagcatttgcgagttacgcttttaacaag
tcacactctacttgctacgcgtggattgcctatcaaacagcttatttaaaagctcattat
cctgcagaatatatggctgcggtactttcaaataatatgaatgatattaagcaagttacc
ttttttatggaagaatgtaaacgaatgggcttaacagtcttgggtccagatgtaaatgaa
tcattctataaatttacggtaaatgatcaaggcgctattcgttttgggatgggagctgta
aaaggtgttggtggtaatgccgttgcgactatcgttgaaaaccgaaaagatggaaattat
aaatccatttttgatttggcaaagcgtattgacttaagagctgcaaataaaaaggcattt
gaaagtttagcactagcaggtggttttgatagttttgatacacatcgtgctcaatatttg
catgatgaaggtgacggagttatgtttgttgaaaaggtattaaaatatgcttcaaaattt
caagaaacgcaaaactcttcacaagtaagcttgtttggagaagccagtgatgtgcaaatt
cccgaaccggaagttccgccatgtgaagagtggggaaccatgaaaaaactaaaactagaa
aaagatgtagttggagtttatatttctggtcatccgctggatgattttaaattggaaatt
aaatattttaccaattgtaaagtttcagattttaataaccttgaaaaatttgtcaataga
gagttaagttttggaggtgtaataagtgacgttcagcatagagaatcaaagtcaggacgc
ggatgggctatttttacagtagaagactatgacgatagttatgagtttaaaatttttggt
gaagagtacttaaagtttaggcattttctagtaccaaattcattcattcacgcacgcgtt
tatataaaagaaggatggactaaccgtgatacaggtaaaaaaggagaccctagaattcaa
tactcaaccatgttacaattgcacgatgtcatggagaaacactcaaaaaaattaactatt
agaatgcctgttcaagatctagaaaatgaccgtatagatcgtttaaaagatttgtttacc
attcataaaggtgaaaagcaattacattttttgatttatgaaatgacagataaggtaaaa
ctgaatatgcctagtagaacaaaaaagatagaaataaataaagagcttttaaacgagtta
caagcagaacagataaactttaaactcaattaa
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