Marixanthomonas sp. SCSIO 43207: INR76_06285
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Entry
INR76_06285 CDS
T07485
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
marx
Marixanthomonas sp. SCSIO 43207
Brite
KEGG Orthology (KO) [BR:
marx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marx03032
]
INR76_06285
03400 DNA repair and recombination proteins [BR:
marx03400
]
INR76_06285
Enzymes [BR:
marx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
INR76_06285
DNA replication proteins [BR:
marx03032
]
Prokaryotic type
DNA Topoisomerases
INR76_06285
DNA repair and recombination proteins [BR:
marx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
INR76_06285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Minor_tail_Z
DUF6782
Motif
Other DBs
NCBI-ProteinID:
UAB82364
LinkDB
All DBs
Position
complement(1323724..1324800)
Genome browser
AA seq
358 aa
AA seq
DB search
MVIKQPDVKKVLEDPTHAAKLADLVYITENKLTIQRHRHGRGFYYTEHGKKIKSKSAIKR
FKSLVIPPAWNEVFITPLENGHLQVVGRDEKNRKQYRYHPHWSQIRNKTKFFKMRAFGKS
LPKIRKQVEDDLKLPIMTKRKCLAVVLHLMEETHIRIGNSYYANTNKTYGLSTMRTKHLE
VLENKLLFQFTGKKGKKHKIVIKDKKMQDLVLQCEEIPGWELFQYYDEDGNHHSIDSGMV
NDYIRDISGDIFSAKDFRTWAATKIFFETLYNIGVEENKSQNKKNILEAYDAAAEGLGNT
RAVCRKYYVHPVLVEKYEDGSIQSYFDKLDTIKNKPKLLSTTETVLLDLLNEYEVRLN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggtaataaaacaacccgatgtaaagaaagtattagaagaccctacccacgccgcaaag
ctggcagacttggtatatattactgaaaacaaacttaccatacaaagacaccgtcacggt
cgcggtttctattacactgaacacggaaaaaagataaaaagtaaatctgccattaagcgg
tttaaaagtcttgttataccgcccgcttggaatgaggtatttatcactccgttagaaaat
ggtcacttacaagttgtaggcagagacgaaaaaaacagaaaacaatacagatatcacccg
cattggtctcagataagaaataaaaccaaattttttaaaatgagagcgtttgggaagtca
ttacccaagataagaaaacaagtagaagatgacttaaaacttccaataatgaccaagcgc
aaatgtctagccgttgttttgcatttgatggaagaaactcacattagaataggcaattcc
tactatgcaaataccaataaaacgtatggattatctactatgcgcaccaaacaccttgaa
gtattagaaaataagcttttatttcagtttaccggtaaaaaaggaaaaaagcataaaata
gtcattaaggataaaaagatgcaagatttggttttgcaatgcgaagaaataccgggttgg
gaattgtttcaatactatgatgaagacggaaaccatcacagcattgacagcggaatggtc
aatgattacattcgtgatattagtggcgatatattttcggcaaaagattttagaacttgg
gctgcaaccaaaattttctttgaaacgctttataacattggtgttgaagaaaacaaatct
caaaacaagaaaaatattttggaagcctatgacgcagctgcagaaggattaggtaacacg
cgtgccgtatgtagaaaatattatgttcacccagttttagttgaaaaatatgaagacggg
agcatacaaagttactttgacaaattggatacaataaagaataaacccaagctactttct
actactgaaactgtattattggatcttttaaatgagtacgaagtacggctaaattaa
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