Marixanthomonas sp. SCSIO 43207: INR76_07315
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Entry
INR76_07315 CDS
T07485
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
marx
Marixanthomonas sp. SCSIO 43207
Pathway
marx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
marx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
INR76_07315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
marx03021
]
INR76_07315
03400 DNA repair and recombination proteins [BR:
marx03400
]
INR76_07315
Enzymes [BR:
marx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
INR76_07315
Transcription machinery [BR:
marx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
INR76_07315
DNA repair and recombination proteins [BR:
marx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
INR76_07315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Peptidase_S80
Motif
Other DBs
NCBI-ProteinID:
UAB79949
LinkDB
All DBs
Position
1544272..1545264
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFSFQKPDKVIMINSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSTIAGVVEDVTEIILNLKQVRFKRQIDEIDNETVTVSVNGGEQLTAGDFQKFIS
GFQVLNPDLVICNMDKKVNLNFEITIEKGRGYVPAEENKKANAPLGTIFTDSIYTPIKNV
KYSIENFRVEQKTDYEKLVFEIQTDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSYNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttagttttcagaagcctgataaagttatcatgatcaattcaactgatttt
gaggggaaatttgaatttcgtcccttagagccaggttatggattgacagttggtaacgca
ttaagacgagtattactttcttcactagaaggatttgcaattacttcggtacgtattgaa
ggggttgatcacgaattttcaaccatagccggagttgtagaagacgtaaccgaaatcatt
cttaacttaaaacaagttcgttttaagagacagatagatgagattgataatgaaactgta
accgtttcagtaaatggaggagagcaattaaccgctggagattttcagaagttcatttca
ggatttcaagtattaaacccagacttggttatctgtaatatggacaaaaaagtgaatctt
aattttgagatcactattgagaaaggtagaggatatgttcctgctgaagaaaataaaaaa
gcaaacgcacctctaggtaccatttttacagattctatctacacaccaataaaaaatgtg
aagtacagtattgaaaacttccgtgtagagcagaaaacagattatgaaaaattagttttc
gaaatccaaacagatggttcaattcatcctaaagatgccttaaccgaagctgcaaaaaca
ttgattcaccactttatgttatttagtgatgagcgtatcacccttgaggctgatgaaatt
gctcaaactgaaacatatgatgaagaatcattgcatatgcgacagttgcttaaaacaaaa
ttagttgatatggacctttcagttcgtgcacttaattgtttaaaagctgctgaagttgat
accttaggagatttggtttcttacaataaaaatgatttaatgaaattcagaaactttggt
aaaaaatcacttaccgagcttgaagaattagttaatgtgaaagggttaaacttcggaatg
gacctttcaaaatataaattagataaagattaa
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