Marixanthomonas sp. SCSIO 43207: INR76_09505
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Entry
INR76_09505 CDS
T07485
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
marx
Marixanthomonas sp. SCSIO 43207
Pathway
marx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
marx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INR76_09505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
marx03019
]
INR76_09505
03009 Ribosome biogenesis [BR:
marx03009
]
INR76_09505
Enzymes [BR:
marx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
INR76_09505
Messenger RNA biogenesis [BR:
marx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
INR76_09505
Ribosome biogenesis [BR:
marx03009
]
Prokaryotic type
rRNA helicases
INR76_09505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_helical
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UAB80352
LinkDB
All DBs
Position
2030322..2032076
Genome browser
AA seq
584 aa
AA seq
DB search
MATFKQLGLEENLLQAITDMGFETPSEVQEKTIPILLEKETDIVSLAQTGTGKTAAFGFP
MLQKIHVESRTTQGLILSPTRELCLQITKELESYGKHKKGLNVVAIYGGASITEQARQIK
KGAQIIVATPGRMKDMIGRGMIDISKIEYCVLDEADEMLNMGFYEDITEILSHSPKDKST
WLFSATMPKDVAKIAKKFMHSPVEITVGSKNVGTENVSHEYYLVNARDRYLALKRLADAN
PDIFSVIFCRTKRDTQKVAEKLIEDGYNAAAIHGDLSQNQRDLVMKSFRTRQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKNGVSMVIVSKSELRKIKAIEKI
IQRSFTKKEIPSGMEICETQLFHLANSIKNTEVNHEIDAYLPNINEVLENFSKEELIKKV
FSVEFTRFYNYYKNEKDLNSVVGDTSEGNSEDSVRYFINIGGRDDFNWMSLKDFLKDLLN
LGQDEVFRVDVKDSFSFFNTDKKHQDMVLSIFNDFKLNGRNISVEISKDGRKKGGGKRGG
KGRGKGKRSGKSFDGGGSKFKGKSRRRNERPSKKGTGGRRRRRN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggctacatttaaacaattaggccttgaagaaaatttacttcaagccattaccgatatg
ggttttgaaactccttcggaagtacaagaaaaaacaatacctattttattagaaaaagaa
acagatattgtttctttagcacaaaccggaaccggaaaaacagcagcctttggatttcct
atgctgcaaaaaattcacgtagaaagccgcactacacaagggcttatattgtcaccaact
cgagaactttgtttgcaaataaccaaagaacttgaaagctacggaaaacacaaaaaaggc
ctcaatgtagtggccatttacggtggtgccagcatcactgagcaagctcgccaaataaaa
aaaggagctcaaattatcgttgctacacctggtagaatgaaggatatgattggtcgaggc
atgattgatatttcaaaaattgaatattgtgtacttgatgaagccgatgaaatgctaaac
atgggcttttatgaagatattactgaaatattatctcattccccaaaagataaaagcact
tggctttttagtgctaccatgccaaaagacgttgcaaaaattgccaaaaaatttatgcac
agcccggtagaaattaccgtaggaagtaaaaacgtaggtacagaaaacgtttcacatgag
tattatttggtaaatgcacgtgatcgctatctagcgctaaaacgcttagcagacgctaat
ccagatatcttttcagttatattttgccgaacaaaaagagatactcaaaaagtagccgaa
aagttaattgaagatggttataatgctgctgcaatacacggagacttaagccagaatcaa
cgtgatttggttatgaaatcgttccgaacgcgtcaaatacaaatgctggttgctacagat
gttgccgctcgcggcattgacgtagatgatatcacacatgtaattaactatcaattacct
gacgagattgaaacctacacacaccgtagtggtcgtacaggacgtgccggtaaaaatggt
gtttctatggtaattgtttcaaaaagtgaacttcgaaagattaaagcgattgaaaaaata
attcagcgaagttttaccaaaaaagaaattccgagtgggatggaaatttgcgaaacgcag
ttgttccacttggcaaatagtatcaaaaataccgaggtaaatcacgagattgacgcttat
cttccaaatattaatgaagttcttgaaaacttcagcaaagaagagttgataaagaaagta
ttttcggtagagtttactcgtttttataattattacaaaaacgaaaaagatttaaattcg
gttgttggtgacacttcagaaggtaacagtgaagacagcgtacgatactttatcaatatt
ggtggtcgtgatgattttaactggatgagcttgaaagacttcttgaaagatttacttaat
ttaggtcaagatgaggtttttcgtgtagatgtaaaagattccttttcttttttcaatacc
gataagaaacaccaagatatggtgttgtcaatatttaatgactttaaactcaatgggcgt
aatatctcagtagaaataagcaaagacggtcgcaaaaaaggcggtggtaaaagaggtgga
aaaggccgaggaaaaggaaaaagaagcggaaaaagttttgatggaggaggttcaaaattt
aaaggtaaaagccgaagaagaaacgaacgaccttcaaaaaaaggtacaggaggaaggcgt
agaagaagaaattaa
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